ENSDARG00000090883


Danio rerio

Features
Gene ID: ENSDARG00000090883
  
Biological name :gabra3
  
Synonyms : gabra3 / gamma-aminobutyric acid (GABA) A receptor, alpha 3
  
Possible biological names infered from orthology : gamma-aminobutyric acid type A receptor alpha3 subunit / Mus musculus gamma-aminobutyric acid (GABA) A receptor, subunit alpha 3 (Gabra3), transcript variant 3, mRNA. / P26049 / P34903
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 44300689
Gene end: 44451712
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000112666
Ensembl peptide - ENSDARP00000149177
swissprot - F1RED8
ZFIN ID - ZDB-GENE-091204-365
Ensembl - ENSDARG00000090883
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GABRA3ENSGALG00000007269Gallus gallus
 GABRA3ENSG00000011677Homo sapiens
 Gabra3ENSMUSG00000031343Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gabra2a / gamma-aminobutyric acid type A receptor alpha2 subunit a / P47869* / GABRA2* / P26048* / Gamma-aminobutyric acid receptor subunit alpha-2 * / gamma-aminobutyric acid type A recept...ENSDARG0000009145979
gabra1 / gamma-aminobutyric acid (GABA) A receptor, alpha 1 / P14867* / P62812* / gamma-aminobutyric acid type A receptor alpha1 subunit* / Mus musculus gamma-aminobutyric acid (GABA) A rec...ENSDARG0000006898978
gabra5 / gamma-aminobutyric acid (GABA) A receptor, alpha 5 / P31644* / Q8BHJ7* / Gamma-aminobutyric acid receptor subunit alpha-5 * / gamma-aminobutyric acid type A receptor alpha5 subunit*ENSDARG0000007073075
gabra4 / gamma-aminobutyric acid (GABA) A receptor, subunit alpha 4 / P48169* / gamma-aminobutyric acid type A receptor alpha4 subunit*ENSDARG0000001338966
gabra6b / gamma-aminobutyric acid (GABA) A receptor, alpha 6b / GABRA6* / Q16445* / gamma-aminobutyric acid type A receptor alpha6 subunit*ENSDARG0000005873664
gabra6a / gamma-aminobutyric acid (GABA) A receptor, alpha 6a / Q16445* / GABRA6* / P16305* / Gamma-aminobutyric acid receptor subunit alpha-6 * / gamma-aminobutyric acid type A receptor al...ENSDARG0000007505860
gabrg2 / gamma-aminobutyric acid (GABA) A receptor, gamma 2 / P18507* / P22723* / Gamma-aminobutyric acid receptor subunit gamma-2 * / gamma-aminobutyric acid type A receptor gamma2 subunit*ENSDARG0000005366549
gabrg1 / gamma-aminobutyric acid type A receptor gamma1 subunit / Q8N1C3* / Q9R0Y8* / Gamma-aminobutyric acid receptor subunit gamma-1 *ENSDARG0000010199549
GABRA2 / gamma-aminobutyric acid type A receptor alpha2 subunit / P47869*ENSDARG0000011373749


Protein motifs (from Interpro)
Interpro ID Name
 IPR001390  Gamma-aminobutyric-acid A receptor, alpha subunit
 IPR006028  Gamma-aminobutyric acid A receptor/Glycine receptor alpha
 IPR006029  Neurotransmitter-gated ion-channel transmembrane domain
 IPR006201  Neurotransmitter-gated ion-channel
 IPR006202  Neurotransmitter-gated ion-channel ligand-binding domain
 IPR018000  Neurotransmitter-gated ion-channel, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0034220 ion transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004888 transmembrane signaling receptor activity IEA
 molecular_functionGO:0004890 GABA-A receptor activity IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005230 extracellular ligand-gated ion channel activity IEA


Pathways (from Reactome)
Pathway description
GABA A receptor activation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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