ENSDARG00000091271


Danio rerio

Features
Gene ID: ENSDARG00000091271
  
Biological name :si:ch211-225g23.1
  
Synonyms : si:ch211-225g23.1
  
Possible biological names infered from orthology : CENPT / centromere protein T / Q3TJM4 / Q96BT3
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 6394929
Gene end: 6418099
  
Corresponding Affymetrix probe sets: Dr.13961.2.A1_a_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000115746
Ensembl peptide - ENSDARP00000120776
NCBI entrez gene - 562197     See in Manteia.
RefSeq - XM_005161005
RefSeq - XM_017353029
RefSeq - XM_017353030
swissprot - E9QJH2
swissprot - E9QIT3
ZFIN ID - ZDB-GENE-030131-3256
Ensembl - ENSDARG00000091271
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CENPTENSGALG00000028900Gallus gallus
 CENPTENSG00000102901Homo sapiens
 CenptENSMUSG00000036672Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR009072  Histone-fold
 IPR028255  Centromere protein T
 IPR035425  CENP-T/Histone H4, histone fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051382 kinetochore assembly IEA
 biological_processGO:1903394 protein localization to kinetochore involved in kinetochore assembly IBA
 cellular_componentGO:0000776 kinetochore IEA
 cellular_componentGO:0000788 nuclear nucleosome IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0042393 histone binding IBA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal
Separation of Sister Chromatids
Resolution of Sister Chromatid Cohesion
RHO GTPases Activate Formins
Deposition of new CENPA-containing nucleosomes at the centromere


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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