ENSDARG00000091408


Danio rerio
microtubulemtcl1bundleplasmamembraneproteinsogaformationregulationautophagyestablishmentmaintenanceepithelialcellapicalbasalpolarityspindlepoleextracellularspaceapicolaterallateralmidbodybinding

Features
Gene ID: ENSDARG00000091408
  
Biological name :mtcl1
  
Synonyms : microtubule crosslinking factor 1 / mtcl1
  
Possible biological names infered from orthology : Microtubule cross-linking factor 1 / Q3UHU5 / Q9Y4B5
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 54482603
Gene end: 54509065
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000105439
Ensembl peptide - ENSDARP00000145218
swissprot - E7FED6
ZFIN ID - ZDB-GENE-120508-3
Ensembl - ENSDARG00000091408
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MTCL1ENSGALG00000038316Gallus gallus
 MTCL1ENSG00000168502Homo sapiens
 Mtcl1ENSMUSG00000052105Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
soga3a / SOGA family member 3aENSDARG0000006331138
soga3b / SOGA family member 3bENSDARG0000007545538
soga3a / SOGA family member 3aENSDARG0000009724538
soga1 / suppressor of glucose, autophagy associated 1 / O94964*ENSDARG0000006307527
si:ch211-197l9.2 / SOGA3* / Q5TF21* / Q6NZL0* / AL096711.2* / Protein SOGA3 * / SOGA family member 3*ENSDARG000000782443


Protein motifs (from Interpro)
Interpro ID Name
 IPR027881  Protein SOGA


Gene Ontology (GO)
cellular component organizationmicrotubule-based processcatabolic processcellular metabolic processprocess utilizing autophagic mechanismestablishment or maintenance of cell polaritycellular component organizationmicrotubule-based processcatabolic processcellular metabolic processprocess utilizing autophagic mechanismestablishment or maintenance of cell polaritycellular component organizationmicrotubule-based processcatabolic processcellular metabolic processprocess utilizing autophagic mechanismestablishment or maintenance of cell polaritycellular component organizationmicrotubule-based processcatabolic processcellular metabolic processprocess utilizing autophagic mechanismestablishment or maintenance of cell polaritycellular component organizationmicrotubule-based processcatabolic processcellular metabolic processprocess utilizing autophagic mechanismestablishment or maintenance of cell polaritycellular component organizationmicrotubule-based processcatabolic processcellular metabolic processprocess utilizing autophagic mechanismestablishment or maintenance of cell polaritycellular component organizationmicrotubule-based processcatabolic processcellular metabolic processprocess utilizing autophagic mechanismestablishment or maintenance of cell polaritycellular component organizationmicrotubule-based processcatabolic processcellular metabolic processprocess utilizing autophagic mechanismestablishment or maintenance of cell polaritycellular component organizationmicrotubule-based processcatabolic processcellular metabolic processprocess utilizing autophagic mechanismestablishment or maintenance of cell polaritycellular component organizationmicrotubule-based processcatabolic processcellular metabolic processprocess utilizing autophagic mechanismestablishment or maintenance of cell polaritycellular component orgacellular component organizationmicrotubule-based procemicrotubule-based processcatabolic processcatabolic processcellular metabolic proccellular metabolic processprocess utilizing autopprocess utilizing autophagic mechanismestablishment or mainteestablishment or maintenance of cell polarity
protein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein binding
cellorganelleextracellular regionmembranecellorganelleextracellular regionmembranecellorganelleextracellular regionmembranecellorganelleextracellular regionmembranecellorganelleextracellular regionmembranecellorganelleextracellular regionmembranecellorganelleextracellular regionmembranecellorganelleextracellular regionmembranecellorganelleextracellular regionmembranecellorganelleextracellular regionmembranecellcellorganelleorganelleextracellular regionextracellular regionmembranemembrane
TypeGO IDTermEv.Code
 biological_processGO:0001578 microtubule bundle formation IBA
 biological_processGO:0010506 regulation of autophagy IEA
 biological_processGO:0045197 establishment or maintenance of epithelial cell apical/basal polarity IBA
 cellular_componentGO:0000922 spindle pole IBA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0016327 apicolateral plasma membrane IBA
 cellular_componentGO:0016328 lateral plasma membrane IBA
 cellular_componentGO:0030496 midbody IBA
 cellular_componentGO:0097427 microtubule bundle IBA
 molecular_functionGO:0008017 microtubule binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr