ENSDARG00000094010


Danio rerio

Features
Gene ID: ENSDARG00000094010
  
Biological name :swt1
  
Synonyms : swt1 / SWT1 RNA endoribonuclease homolog
  
Possible biological names infered from orthology : Q5T5J6 / Q9DBQ9 / Transcriptional protein SWT1
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 34343649
Gene end: 34388331
  
Corresponding Affymetrix probe sets: Dr.4990.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000113234
Ensembl peptide - ENSDARP00000117145
NCBI entrez gene - 559432     See in Manteia.
RefSeq - XM_009294796
RefSeq - XM_009294798
RefSeq - XM_017352631
RefSeq - XM_021468647
swissprot - Q5RG89
swissprot - Q5RG87
ZFIN ID - ZDB-GENE-041015-373
Ensembl - ENSDARG00000094010
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SWT1ENSGALG00000034230Gallus gallus
 SWT1ENSG00000116668Homo sapiens
 Swt1ENSMUSG00000052748Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002716  PIN domain
 IPR029060  PIN-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IBA
 cellular_componentGO:0005634 nucleus IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr