ENSDARG00000094131


Danio rerio

Features
Gene ID: ENSDARG00000094131
  
Biological name :ftr19
  
Synonyms : finTRIM family, member 19 / ftr19
  
Possible biological names infered from orthology : Q8C0E3 / Q96LD4 / TRIM47 / Trim80 / tripartite motif containing 47 / tripartite motif-containing 80
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 47944967
Gene end: 47951567
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000088827
Ensembl peptide - ENSDARP00000117323
swissprot - B0S6S1
swissprot - F1QTA0
ZFIN ID - ZDB-GENE-090506-5
Ensembl - ENSDARG00000094131
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRIM47ENSGALG00000028301Gallus gallus
 Q96LD4ENSG00000132481Homo sapiens
 Q8C0E3ENSMUSG00000020773Mus musculus
 Trim80ENSMUSG00000070332Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ftr14 / finTRIM family, member 14 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000005329355
ftr42 / finTRIM family, member 42 / Q96LD4* / TRIM47* / tripartite motif containing 47*ENSDARG0000011499254
ftr16 / ftr96 / finTRIM family, member 96 / Q96LD4* / Q8C0E3* / TRIM47* / Trim80* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000003204353
ftr23 / finTRIM family, member 23 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000006798553
FO834803.1 / Q96LD4* / TRIM47* / tripartite motif containing 47*ENSDARG0000011172253
ftr56 / finTRIM family, member 56 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000003095452
ftr11 / finTRIM family, member 11 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000003864652
ftr12 / ftr96 / finTRIM family, member 12 / Q96LD4* / Q8C0E3* / TRIM47* / Trim80* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000005336652
ftr61 / finTRIM family, member 61 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000005552052
CR352329.1 / Q96LD4* / TRIM47* / tripartite motif containing 47*ENSDARG0000005547651
ftr13 / finTRIM family, member 13 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000007953751
ftr24 / finTRIM family, member 24 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000000839650
ftr57 / finTRIM family, member 57 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000007436050
ftr01 / finTRIM family, member 1 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000000390949
ftr64 / finTRIM family, member 64 / Q96LD4* / TRIM47* / tripartite motif containing 47*ENSDARG0000010151449
ftr58 / finTRIM family, member 58 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000007123848
ftr59 / finTRIM family, member 59 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000009586448
ftr55 / finTRIM family, member 55 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000000916147
ftr93 / finTRIM family, member 93 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000003985246
ftr51 / finTRIM family, member 51 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000002910545


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR017907  Zinc finger, RING-type, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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