ENSDARG00000094204


Danio rerio

Features
Gene ID: ENSDARG00000094204
  
Biological name :elp1
  
Synonyms : elongator complex protein 1 / elp1
  
Possible biological names infered from orthology : Ikbkap / inhibitor of kappa light polypeptide enhancer in B cells, kinase complex-associated protein / O95163 / Q7TT37
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 6245942
Gene end: 6286966
  
Corresponding Affymetrix probe sets: Dr.9310.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000121511
Ensembl peptide - ENSDARP00000145759
Ensembl peptide - ENSDARP00000135682
Ensembl peptide - ENSDARP00000135528
NCBI entrez gene - 561039     See in Manteia.
RefSeq - XM_684442
swissprot - E9QB69
swissprot - A0A0R4IKD3
swissprot - A0A0R4IJ07
ZFIN ID - ZDB-GENE-071116-7
Ensembl - ENSDARG00000094204
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ELP1ENSGALG00000001947Gallus gallus
 ELP1ENSG00000070061Homo sapiens
 IkbkapENSMUSG00000028431Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006849  Elongator complex protein 1
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017941  Rieske [2Fe-2S] iron-sulphur domain
 IPR017986  WD40-repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002098 tRNA wobble uridine modification IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0048484 enteric nervous system development IMP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0033588 Elongator holoenzyme complex IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000706 posterior intestine posterior intestine enteric neuron absent , abnormal
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 ZFA:0001338 intestine intestine enteric neuron decreased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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