ENSDARG00000094466


Danio rerio

Features
Gene ID: ENSDARG00000094466
  
Biological name :si:ch73-199e17.1
  
Synonyms : si:ch73-199e17.1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 7678136
Gene end: 7684002
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000009320
Ensembl peptide - ENSDARP00000093488
NCBI entrez gene - 792024     See in Manteia.
RefSeq - NM_001168287
RefSeq Peptide - NP_001161759
swissprot - F1QQ90
swissprot - E7EYT7
ZFIN ID - ZDB-GENE-100921-8
Ensembl - ENSDARG00000094466
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tuba8l3 / tubulin, alpha 8 like 3ENSDARG0000007015590
tuba1a / tubulin, alpha 1aENSDARG0000000188989
tuba8l4 / tubulin, alpha 8 like 4ENSDARG0000000626089
si:ch211-114n24.6ENSDARG0000003670089
tuba1c / tubulin, alpha 1cENSDARG0000005521689
tuba8l2 / tubulin, alpha 8 like 2 / TUBA4A* / P68366* / P68368* / tubulin alpha 4a*ENSDARG0000003116488
tuba1b / tuba1c / tubulin, alpha 1cENSDARG0000004536788
tuba2 / tubulin, alpha 2 / TUBA1B* / P05213* / P68363* / tubulin alpha 1b*ENSDARG0000004501487
tuba8l / tubulin, alpha 8 like / TUBA3C* / TUBA3D* / TUBA3E* / Q6PEY2* / Q13748* / tubulin alpha 3d* / tubulin alpha 3e* / tubulin alpha 3c*ENSDARG0000004270886
tuba7l / tubulin, alpha 7 like / P05214* / Tuba3a* / Tuba3b* / TUBA3C* / TUBA3D* / TUBA3E* / Q13748* / Q6PEY2* / tubulin alpha 3c* / tubulin alpha 3d* / tubulin alpha 3e* / tubulin, alpha 3...ENSDARG0000010464386


Protein motifs (from Interpro)
Interpro ID Name
 IPR000217  Tubulin
 IPR002452  Alpha tubulin
 IPR003008  Tubulin/FtsZ, GTPase domain
 IPR008280  Tubulin/FtsZ, C-terminal
 IPR017975  Tubulin, conserved site
 IPR018316  Tubulin/FtsZ, 2-layer sandwich domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization IEA
 biological_processGO:0007017 microtubule-based process IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005200 structural constituent of cytoskeleton IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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