ENSDARG00000095086


Danio rerio

Features
Gene ID: ENSDARG00000095086
  
Biological name :cfdp1
  
Synonyms : cfdp1 / craniofacial development protein 1
  
Possible biological names infered from orthology : O88271 / Q9UEE9
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 22416051
Gene end: 22486767
  
Corresponding Affymetrix probe sets: Dr.6391.2.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000102660
NCBI entrez gene - 567870     See in Manteia.
RefSeq - NM_001100035
RefSeq Peptide - NP_001093505
swissprot - A3KPL8
ZFIN ID - ZDB-GENE-030131-5736
Ensembl - ENSDARG00000095086
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CFDP1ENSGALG00000002853Gallus gallus
 CFDP1ENSG00000153774Homo sapiens
 Cfdp1ENSMUSG00000031954Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011421  BCNT-C domain
 IPR027124  SWR1-complex protein 5/Craniofacial development protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007275 multicellular organism development IEA
 cellular_componentGO:0000776 kinetochore IEA
 cellular_componentGO:0000777 condensed chromosome kinetochore IEA
 cellular_componentGO:0005694 chromosome IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000076 swim bladder swim bladder aplastic , abnormal
Show

 ZFA:0000184 cleithrum cleithrum bone mineralization decreased process quality , abnormal
Show

 ZFA:0000250 opercle opercle bone mineralization decreased process quality , abnormal
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 ZFA:0000547 mouth mouth shape , abnormal
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 ZFA:0001094 whole organism whole organism decreased amount , abnormal
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 ZFA:0001117 post-vent region post-vent region increased curvature , abnormal
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 ZFA:0001205 Meckel s cartilage Meckels cartilage morphology , abnormal
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 ZFA:0001400 ceratohyal cartilage ceratohyal cartilage shape , abnormal
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 ZFA:0001516 ceratobranchial cartilage ceratobranchial cartilage disorganized , abnormal
Show

 ZFA:0001617 otolith otolith morphology , abnormal
otolith fused with otolith , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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