ENSDARG00000096310


Danio rerio

Features
Gene ID: ENSDARG00000096310
  
Biological name :wu:fj64h06
  
Synonyms : wu:fj64h06
  
Possible biological names infered from orthology : Q15572 / Q6PDZ2 / TAF1C / TATA-box binding protein associated factor, RNA polymerase I subunit C
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 5803245
Gene end: 5831413
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000125622
Ensembl peptide - ENSDARP00000126104
swissprot - I3IRW4
swissprot - I3IT49
ZFIN ID - ZDB-GENE-030131-8286
Ensembl - ENSDARG00000096310
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TAF1CENSGALG00000025868Gallus gallus
 TAF1CENSG00000103168Homo sapiens
 Taf1cENSMUSG00000031832Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006360 transcription by RNA polymerase I IBA
 cellular_componentGO:0000120 RNA polymerase I transcription factor complex IBA


Pathways (from Reactome)
Pathway description
B-WICH complex positively regulates rRNA expression
RNA Polymerase I Transcription Initiation
RNA Polymerase I Promoter Escape
RNA Polymerase I Chain Elongation
RNA Polymerase I Transcription Termination


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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