ENSDARG00000096756


Danio rerio

Features
Gene ID: ENSDARG00000096756
  
Biological name :si:ch211-196c10.13
  
Synonyms : si:ch211-196c10.13
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 23142946
Gene end: 23143712
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000127222
NCBI entrez gene - 100334878     See in Manteia.
swissprot - U3JAF4
ZFIN ID - ZDB-GENE-130603-71
Ensembl - ENSDARG00000096756
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
bhlhe23 / basic helix-loop-helix family, member e23 / Q8BGW3* / Q8NDY6* / Class E basic helix-loop-helix protein 23 *ENSDARG0000003758834
bhlhe22 / basic helix-loop-helix family, member e22 / Q8NFJ8*ENSDARG0000005803934
olig2 / oligodendrocyte lineage transcription factor 2 / Q13516* / Q9EQW6* / oligodendrocyte transcription factor 2*ENSDARG0000004094629
olig4 / oligodendrocyte transcription factor 4ENSDARG0000005261026
olig1 / oligodendrocyte transcription factor 1 / Q8TAK6* / Q9JKN5*ENSDARG0000004094822


Protein motifs (from Interpro)
Interpro ID Name
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain
 IPR032662  Class E basic helix-loop-helix protein 23


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0022008 neurogenesis IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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