ENSDARG00000098247


Danio rerio

Features
Gene ID: ENSDARG00000098247
  
Biological name :det1
  
Synonyms : det1 / DET1, COP1 ubiquitin ligase partner
  
Possible biological names infered from orthology : DET1 homolog / Q7L5Y6 / Q9D0A0
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 12399046
Gene end: 12412704
  
Corresponding Affymetrix probe sets: Dr.6347.1.A1_at (Zebrafish Array)   NM_199670_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000141939
Ensembl peptide - ENSDARP00000154273
NCBI entrez gene - 324089     See in Manteia.
RefSeq - NM_199670
RefSeq Peptide - NP_955964
swissprot - Q6DG33
ZFIN ID - ZDB-GENE-030131-2809
Ensembl - ENSDARG00000098247
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DET1ENSGALG00000006750Gallus gallus
 DET1ENSG00000140543Homo sapiens
 Det1ENSMUSG00000030610Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR019138  De-etiolated protein 1, Det1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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