ENSDARG00000098689


Danio rerio

Features
Gene ID: ENSDARG00000098689
  
Biological name :ptpn23b
  
Synonyms : protein tyrosine phosphatase, non-receptor type 23, b / ptpn23b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 19241372
Gene end: 19270755
  
Corresponding Affymetrix probe sets: Dr.18352.1.A1_at (Zebrafish Array)   NM_001044928_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000150796
Ensembl peptide - ENSDARP00000139576
NCBI entrez gene - 560417     See in Manteia.
RefSeq - NM_001044928
RefSeq Peptide - NP_001038393
swissprot - B7ZV28
ZFIN ID - ZDB-GENE-060503-179
Ensembl - ENSDARG00000098689
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ptpn23a / protein tyrosine phosphatase, non-receptor type 23, a / PTPN23* / Q6PB44* / Q9H3S7* / protein tyrosine phosphatase, non-receptor type 23* / Tyrosine-protein phosphatase non-recept...ENSDARG0000007012450
pdcd6ip / programmed cell death 6 interacting protein / Q8WUM4* / Q9WU78*ENSDARG0000002526915
rhpn1 / rhophilin, Rho GTPase binding protein 1 / Q61085* / Q8TCX5* / Rhophilin-1 *ENSDARG0000005245410
rhpn2 / rhophilin, Rho GTPase binding protein 2 / Q8BWR8* / Q8IUC4* / Rhophilin-2 *ENSDARG000000145779


Protein motifs (from Interpro)
Interpro ID Name
 IPR004328  BRO1 domain
 IPR025304  ALIX V-shaped domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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