ENSDARG00000098820


Danio rerio

Features
Gene ID: ENSDARG00000098820
  
Biological name :ftr67
  
Synonyms : finTRIM family, member 67 / ftr67
  
Possible biological names infered from orthology : Q8C0E3 / Q96LD4 / TRIM47 / Trim80 / tripartite motif containing 47 / tripartite motif-containing 80
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 51065777
Gene end: 51087077
  
Corresponding Affymetrix probe sets: Dr.694.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000133898
NCBI entrez gene - 336567     See in Manteia.
RefSeq - NM_001039719
RefSeq Peptide - NP_001034808
swissprot - A0A0R4IJ94
ZFIN ID - ZDB-GENE-060312-27
Ensembl - ENSDARG00000098820
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRIM47ENSGALG00000028301Gallus gallus
 Q96LD4ENSG00000132481Homo sapiens
 Q8C0E3ENSMUSG00000020773Mus musculus
 Trim80ENSMUSG00000070332Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ftr14 / finTRIM family, member 14 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000005329347
ftr12 / ftr15 / finTRIM family, member 15 / Q96LD4* / Q8C0E3* / TRIM47* / Trim80* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000007411847
ftr16 / ftr96 / finTRIM family, member 96 / Q96LD4* / Q8C0E3* / TRIM47* / Trim80* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000003204346
ftr12 / ftr96 / finTRIM family, member 12 / Q96LD4* / Q8C0E3* / TRIM47* / Trim80* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000005336646
ftr13 / finTRIM family, member 13 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000007953746
ftr11 / finTRIM family, member 11 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000003864645
ftr33 / finTRIM family, member 33 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000009503245
ftr61 / finTRIM family, member 61 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000005552044
ftr95 / finTRIM family, member 95 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000007373544
ftr34 / finTRIM family, member 34 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000007961444
ftr36 / finTRIM family, member 36 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000008705744
ftr35 / ftr37 / finTRIM family, member 35 / Q96LD4* / Q8C0E3* / TRIM47* / Trim80* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000008938844
ftr38 / finTRIM family, member 38 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000009567844
ftr64 / finTRIM family, member 64 / Q96LD4* / TRIM47* / tripartite motif containing 47*ENSDARG0000010151444
FO834803.1 / Q96LD4* / TRIM47* / tripartite motif containing 47*ENSDARG0000011172244
ftr66 / finTRIM family, member 66 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000000532743
ftr55 / finTRIM family, member 55 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000000916143
ftr82 / finTRIM family, member 82 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000005564743
ftr29 / finTRIM family, member 29 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000007535543
ftr22 / finTRIM family, member 22 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000007696943


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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