ENSDARG00000099291


Danio rerio

Features
Gene ID: ENSDARG00000099291
  
Biological name :lsr
  
Synonyms : lipolysis stimulated lipoprotein receptor / lsr
  
Possible biological names infered from orthology : Q86X29 / Q99KG5
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 33937756
Gene end: 33965440
  
Corresponding Affymetrix probe sets: Dr.2700.1.A1_s_at (Zebrafish Array)   NM_001025472_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000130925
Ensembl peptide - ENSDARP00000141082
Ensembl peptide - ENSDARP00000140732
Ensembl peptide - ENSDARP00000136747
NCBI entrez gene - 553218     See in Manteia.
RefSeq - NM_001025472
RefSeq - XM_005157633
RefSeq Peptide - NP_001020643
swissprot - A0A0R4ICU6
swissprot - B0CLZ5
swissprot - A0A0R4IV87
swissprot - A0A0R4IPT5
ZFIN ID - ZDB-GENE-050913-73
Ensembl - ENSDARG00000099291
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LSRENSG00000105699Homo sapiens
 LsrENSMUSG00000001247Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ildr2 / immunoglobulin-like domain containing receptor 2 / B5TVM2* / Q71H61*ENSDARG0000001418027
ildr1b / immunoglobulin-like domain containing receptor 1b / ILDR1* / Q8CBR1* / Q86SU0* / immunoglobulin like domain containing receptor 1*ENSDARG0000004091022
ildr1a / immunoglobulin-like domain containing receptor 1a / ILDR1* / Q8CBR1* / Q86SU0* / immunoglobulin like domain containing receptor 1*ENSDARG0000010392920
si:zfos-1011f11.2 / ILDR2* / B5TVM2* / Q71H61* / immunoglobulin like domain containing receptor 2*ENSDARG0000010107310


Protein motifs (from Interpro)
Interpro ID Name
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR008664  LISCH7
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007492 endoderm development IMP
 biological_processGO:0031016 pancreas development IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000123 liver liver decreased size , abnormal
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 ZFA:0000140 pancreas pancreas decreased size , abnormal
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 ZFA:0001338 intestine intestine morphology , abnormal
intestine decreased size , abnormal
Show

 ZFA:0009102 pancreatic B cell pancreatic B cell mislocalised , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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