ENSDARG00000099449


Danio rerio

Features
Gene ID: ENSDARG00000099449
  
Biological name :atrxl
  
Synonyms : alpha thalassemia/mental retardation syndrome X-linked, like / atrxl
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 23045096
Gene end: 23082852
  
Corresponding Affymetrix probe sets: Dr.13612.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000137092
swissprot - A0A0R4IS87
ZFIN ID - ZDB-GENE-030131-2019
Ensembl - ENSDARG00000099449
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
atrx / alpha thalassemia/mental retardation syndrome X-linked homolog (human) / P46100* / Q61687* / ATRX, chromatin remodeler* / Transcriptional regulator ATRX *ENSDARG0000004223643
rad54l2 / RAD54 like 2 / Q9Y4B4* / RAD54 like 2 (S. cerevisiae)*ENSDARG0000006303117
rad54l / RAD54 like / P70270* / Q92698* / DNA repair and recombination protein RAD54-like *ENSDARG0000001862311
rad54b / RAD54 homolog B (S. cerevisiae) / FSBP* / O95073* / Q6PFE3* / Q9Y620* / fibrinogen silencer binding protein* / DNA repair and recombination protein RAD54B *ENSDARG0000009213411


Protein motifs (from Interpro)
Interpro ID Name
 IPR000330  SNF2-related, N-terminal domain
 IPR001650  Helicase, C-terminal
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR025766  ADD domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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