ENSDARG00000099519


Danio rerio
dnazgc:66475photolyaseclassalphacryptochromefad-bindingdomainn-terminalrossmann-likebetasandwichfoldconservedsiterepaircellularcomponentdeoxyribodipyrimidinephoto-lyaseactivity

Features
Gene ID: ENSDARG00000099519
  
Biological name :zgc:66475
  
Synonyms : zgc:66475
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 13907452
Gene end: 13940917
  
Corresponding Affymetrix probe sets: Dr.23983.1.A1_at (Zebrafish Array)   NM_201064_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000144753
Ensembl peptide - ENSDARP00000137694
NCBI entrez gene - 394039     See in Manteia.
RefSeq - XM_005168415
RefSeq - XM_021479429
RefSeq - NM_201064
RefSeq - XM_021479428
RefSeq - XM_005168414
RefSeq Peptide - NP_957358
swissprot - Q7SYI9
swissprot - A0A0R4IS22
ZFIN ID - ZDB-GENE-040426-1644
Ensembl - ENSDARG00000099519
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000007536Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005101  Cryptochrome/DNA photolyase, FAD-binding domain
 IPR006050  DNA photolyase, N-terminal
 IPR008148  DNA photolyase class 2
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold
 IPR032673  DNA photolyase class 2, conserved site


Gene Ontology (GO)
nitrogen compound metabolic processresponse to stresscellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimulusnitrogen compound metabolic processresponse to stresscellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimulusnitrogen compound metabolic processresponse to stresscellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimulusnitrogen compound metabolic processresponse to stresscellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimulusnitrogen compound metabolic processresponse to stresscellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimulusnitrogen compound metabolic processresponse to stresscellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimulusnitrogen compound metabolic processresponse to stresscellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimulusnitrogen compound metabolic processresponse to stresscellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimulusnitrogen compound metabolic processresponse to stresscellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimulusnitrogen compound metabolic processresponse to stresscellular metabolic processprimary metabolic processorganic substance metabolic processcellular response to stimulusnitrogen compound metabnitrogen compound metabolic processresponse to stressresponse to stresscellular metabolic proccellular metabolic processprimary metabolic proceprimary metabolic processorganic substance metaborganic substance metabolic processcellular response to stcellular response to stimulus
catalytic activity, acting on DNAlyase activitycatalytic activity, acting on DNAlyase activitycatalytic activity, acting on DNAlyase activitycatalytic activity, acting on DNAlyase activitycatalytic activity, acting on DNAlyase activitycatalytic activity, acting on DNAlyase activitycatalytic activity, acting on DNAlyase activitycatalytic activity, acting on DNAlyase activitycatalytic activity, acting on DNAlyase activitycatalytic activity, acting on DNAlyase activitycatalytic activity, acting on DNAcatalytic activity, acting on DNAlyase activitylyase activity
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003904 deoxyribodipyrimidine photo-lyase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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