ENSDARG00000099528


Danio rerio

Features
Gene ID: ENSDARG00000099528
  
Biological name :dus3l
  
Synonyms : dihydrouridine synthase 3-like (S. cerevisiae) / dus3l
  
Possible biological names infered from orthology : AC011499.1 / dihydrouridine synthase 3 like / Q96G46
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 420350
Gene end: 432083
  
Corresponding Affymetrix probe sets: Dr.17122.1.A1_at (Zebrafish Array)   NM_200674_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000134766
Ensembl peptide - ENSDARP00000136602
NCBI entrez gene - 393647     See in Manteia.
RefSeq - NM_200674
RefSeq Peptide - NP_956968
swissprot - A0A0R4IQ00
swissprot - A0A0R4IIP1
ZFIN ID - ZDB-GENE-040426-1260
Ensembl - ENSDARG00000099528
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000001800Gallus gallus
 AC011499.1ENSG00000267157Homo sapiens
 DUS3LENSG00000141994Homo sapiens
 Dus3lENSMUSG00000007603Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000571  Zinc finger, CCCH-type
 IPR001269  tRNA-dihydrouridine synthase
 IPR013785  Aldolase-type TIM barrel
 IPR018517  tRNA-dihydrouridine synthase, conserved site
 IPR035587  DUS-like, FMN-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002943 tRNA dihydrouridine synthesis IEA
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0017150 tRNA dihydrouridine synthase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0050660 flavin adenine dinucleotide binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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