ENSDARG00000099572


Danio rerio

Features
Gene ID: ENSDARG00000099572
  
Biological name :hmgn2
  
Synonyms : high mobility group nucleosomal binding domain 2 / hmgn2
  
Possible biological names infered from orthology : Gm10282 / Gm16494 / Gm20379 / Gm6594 / high mobility group nucleosomal binding domain 4 / HMGN4 / Non-histone chromosomal protein HMG-17 / O00479 / P05204 / P09602 / predicted pseudogene 10282
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 51180938
Gene end: 51184126
  
Corresponding Affymetrix probe sets: Dr.5605.4.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000131203
NCBI entrez gene - 569904     See in Manteia.
RefSeq - NM_001142543
RefSeq Peptide - NP_001136015
swissprot - Q3B732
ZFIN ID - ZDB-GENE-051030-81
Ensembl - ENSDARG00000099572
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HMGN4ENSGALG00000032207Gallus gallus
 HMGN2ENSG00000198830Homo sapiens
 HMGN4ENSG00000182952Homo sapiens
 Gm16494ENSMUSG00000091775Mus musculus
 Gm20379ENSMUSG00000100622Mus musculus
 Gm6594ENSMUSG00000073371Mus musculus
 Hmgn2ENSMUSG00000003038Mus musculus
 P09602ENSMUSG00000070713Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000079  High mobility group protein HMGN


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0000785 chromatin IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0031492 nucleosomal DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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