ENSDARG00000100288


Danio rerio
matriximpg2bdomainegf-likeinterphotoreceptormembraneseaconservedsiteproteoglycanvisualperceptionintegralcomponentextracellularstructuralconstituenthyaluronicacidbinding

Features
Gene ID: ENSDARG00000100288
  
Biological name :impg2b
  
Synonyms : impg2b / interphotoreceptor matrix proteoglycan 2b
  
Possible biological names infered from orthology : IMPG2 / interphotoreceptor matrix proteoglycan 2 / Q80XH2 / Q9BZV3
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 28320794
Gene end: 28353903
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000133706
Ensembl peptide - ENSDARP00000139160
swissprot - A0A0R4IE69
swissprot - A0A0R4IT75
ZFIN ID - ZDB-GENE-081031-56
Ensembl - ENSDARG00000100288
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 IMPG2ENSGALG00000015322Gallus gallus
 IMPG2ENSG00000081148Homo sapiens
 Impg2ENSMUSG00000035270Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
impg2b / interphotoreceptor matrix proteoglycan 2b / IMPG2* / Q9BZV3* / Q80XH2* / interphotoreceptor matrix proteoglycan 2*ENSDARG0000010010582
impg2a / interphotoreceptor matrix proteoglycan 2a / IMPG2* / Q9BZV3* / Q80XH2* / interphotoreceptor matrix proteoglycan 2*ENSDARG0000001978249
impg1b / interphotoreceptor matrix proteoglycan 1bENSDARG0000007483934
impg1a / interphotoreceptor matrix proteoglycan 1aENSDARG0000007718729


Protein motifs (from Interpro)
Interpro ID Name
 IPR000082  SEA domain
 IPR000742  EGF-like domain
 IPR013032  EGF-like, conserved site
 IPR032975  Interphotoreceptor matrix proteoglycan 2


Gene Ontology (GO)
system processsystem processsystem processsystem processsystem processsystem processsystem processsystem processsystem processsystem processsystem processsystem process
extracellular matrix structural constituention bindingcarbohydrate derivative bindingsmall molecule bindingextracellular matrix structural constituention bindingcarbohydrate derivative bindingsmall molecule bindingextracellular matrix structural constituention bindingcarbohydrate derivative bindingsmall molecule bindingextracellular matrix structural constituention bindingcarbohydrate derivative bindingsmall molecule bindingextracellular matrix structural constituention bindingcarbohydrate derivative bindingsmall molecule bindingextracellular matrix structural constituention bindingcarbohydrate derivative bindingsmall molecule bindingextracellular matrix structural constituention bindingcarbohydrate derivative bindingsmall molecule bindingextracellular matrix structural constituention bindingcarbohydrate derivative bindingsmall molecule bindingextracellular matrix structural constituention bindingcarbohydrate derivative bindingsmall molecule bindingextracellular matrix structural constituention bindingcarbohydrate derivative bindingsmall molecule bindingextracellular matrix structural conextracellular matrix structural constituention bindingion bindingcarbohydrate derivative bindingcarbohydrate derivative bindingsmall molecule bindingsmall molecule binding
membraneextracellular regionmembraneextracellular regionmembraneextracellular regionmembraneextracellular regionmembraneextracellular regionmembraneextracellular regionmembraneextracellular regionmembraneextracellular regionmembraneextracellular regionmembraneextracellular regionmembranemembraneextracellular regionextracellular region
TypeGO IDTermEv.Code
 biological_processGO:0007601 visual perception IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0033165 interphotoreceptor matrix IEA
 molecular_functionGO:0005201 extracellular matrix structural constituent IEA
 molecular_functionGO:0005540 hyaluronic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr