ENSDARG00000100514


Danio rerio

Features
Gene ID: ENSDARG00000100514
  
Biological name :cfap20
  
Synonyms : cfap20 / cilia and flagella associated protein 20 / Q6PBJ2
  
Possible biological names infered from orthology : Q8BTU1 / Q9Y6A4
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 1393360
Gene end: 1405363
  
Corresponding Affymetrix probe sets: Dr.25597.1.S1_at (Zebrafish Array)   NM_200811_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000140557
NCBI entrez gene - 393784     See in Manteia.
RefSeq - NM_200811
RefSeq Peptide - NP_957105
swissprot - A0A0R4IVH3
swissprot - Q6PBJ2
ZFIN ID - ZDB-GENE-040426-1784
Ensembl - ENSDARG00000100514
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CFAP20ENSGALG00000032634Gallus gallus
 CFAP20ENSG00000070761Homo sapiens
 Cfap20ENSMUSG00000031796Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007714  Cilia/flagella-associated protein 20/WDR90/C3orf67


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0014807 regulation of somitogenesis IMP
 biological_processGO:0018095 protein polyglutamylation ISS
 biological_processGO:0060271 cilium assembly ISS
 biological_processGO:0060296 regulation of cilium beat frequency involved in ciliary motility ISS
 biological_processGO:0065001 specification of axis polarity IMP
 biological_processGO:1901207 regulation of heart looping IMP
 biological_processGO:2000147 positive regulation of cell motility ISS
 biological_processGO:2000253 positive regulation of feeding behavior ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005814 centriole ISS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0005929 cilium ISS
 cellular_componentGO:0036064 ciliary basal body ISS
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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