ENSDARG00000100636


Danio rerio

Features
Gene ID: ENSDARG00000100636
  
Biological name :rbm12
  
Synonyms : rbm12 / RNA binding motif protein 12
  
Possible biological names infered from orthology : Gm28036 / Q8R4X3 / Q9NTZ6 / RNA-binding protein 12
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 26376000
Gene end: 26383407
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000136782
Ensembl peptide - ENSDARP00000140887
swissprot - A0A0R4INU1
swissprot - A0A0R4IVW2
ZFIN ID - ZDB-GENE-081022-16
Ensembl - ENSDARG00000100636
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RBM12ENSGALG00000030253Gallus gallus
 RBM12ENSG00000244462Homo sapiens
 Gm28036ENSMUSG00000098950Mus musculus
 Rbm12ENSMUSG00000089824Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rbm12b / RNA binding motif protein 12B / Q66JV4* / Q80YR9* / Q8IXT5* / Rbm12b1* / Rbm12b2* / RNA-binding protein 12B-A * / Mus musculus RNA binding motif protein 12 B2 (Rbm12b2), transcript...ENSDARG0000007971723
zgc:153215ENSDARG0000005588916
hnrnph1l / heterogeneous nuclear ribonucleoprotein H1, like / O35737* / Q9Z2X1* / P70333* / P55795* / HNRNPF* / P31943* / P52597* / HNRNPH2* / HNRNPH1* / heterogeneous nuclear ribonucleopro...ENSDARG0000000555111
esrp1 / A1L1G1 / epithelial splicing regulatory protein 1 / Q3US41* / Q6NXG1* / Mus musculus epithelial splicing regulatory protein 1 (Esrp1), transcript variant 3, mRNA.*ENSDARG0000001124511
hnrnph1 / heterogeneous nuclear ribonucleoprotein H1 / Q9Z2X1* / HNRNPF* / O35737* / P31943* / P52597* / P55795* / P70333* / HNRNPH2* / heterogeneous nuclear ribonucleoprotein F* / heteroge...ENSDARG0000004088111
esrp2 / epithelial splicing regulatory protein 2 / Q8K0G8* / Q9H6T0*ENSDARG0000001881410
grsf1 / G-rich RNA sequence binding factor 1 / Q12849* / Q8C5Q4* / G-rich sequence factor 1 *ENSDARG000000530218
hnrnph3 / heterogeneous nuclear ribonucleoprotein H3 (2H9) / P31942* / heterogeneous nuclear ribonucleoprotein H3* / Mus musculus heteroous nuclear ribonucleoprotein H3 (Hnrnph3), transcrip...ENSDARG000000394664


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034591  RBM12, RNA recognition motif 1
 IPR034594  RBM12, RNA recognition motif 2
 IPR034854  RBM12, RNA recognition motif 5
 IPR034855  RBM12, RNA recognition motif 3
 IPR034856  RBM12, RNA recognition motif 4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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