ENSDARG00000100840


Danio rerio

Features
Gene ID: ENSDARG00000100840
  
Biological name :RF00003
  
Synonyms : RF00003
  
Possible biological names infered from orthology : Gm22706 / Gm24624 / Gm25201 / predicted gene, 22706 / predicted gene, 24624 / predicted gene, 25201 / RNA, U1 small nuclear 120, pseudogene / RNA, U1 small nuclear 122, pseudogene / RNA, U1 small nuclear 131, pseudogene / RNA, U1 small nuclear 148, pseudogene / RNA, U1 small nuclear 20, pseudogene / RNA, U1 small nuclear 32, pseudogene / RNA, U1 small nuclear 44, pseudogene / RNA, U1 small nuclear 46, pseudogene / RNA, U1 small nuclear 59, pseudogene / RNA, U1 small nuclear 98, pseudogene / RNU1-120P / RNU1-122P / RNU1-131P / RNU1-148P / RNU1-20P / RNU1-32P / RNU1-44P / RNU1-46P / RNU1-59P / RNU1-98P
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 33968210
Gene end: 33968352
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl - ENSDARG00000100840
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RF00003ENSG00000273727Homo sapiens
 RF00003ENSG00000275291Homo sapiens
 RF00003ENSG00000274428Homo sapiens
 RNU1-120PENSG00000199879Homo sapiens
 RNU1-122PENSG00000202408Homo sapiens
 RNU1-131PENSG00000238833Homo sapiens
 RNU1-148PENSG00000207201Homo sapiens
 RNU1-20PENSG00000200184Homo sapiens
 RNU1-32PENSG00000200807Homo sapiens
 RNU1-44PENSG00000207182Homo sapiens
 RNU1-46PENSG00000207154Homo sapiens
 RNU1-59PENSG00000201699Homo sapiens
 RNU1-98PENSG00000239023Homo sapiens
 Gm22706ENSMUSG00000088532Mus musculus
 Gm24624ENSMUSG00000064551Mus musculus
 Gm25201ENSMUSG00000065027Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RF00003 / RNU1-98P* / RNU1-20P* / RNU1-32P* / RNU1-44P* / RNU1-46P* / RNU1-59P* / RNU1-120P* / RNU1-122P* / RNU1-131P* / RNU1-148P* / RNA, U1 small nuclear 32, pseudogene* / RNA, U1 small n...ENSDARG0000010938597
RF00003 / RNU1-98P* / RNU1-20P* / RNU1-32P* / RNU1-44P* / RNU1-46P* / RNU1-59P* / RNU1-120P* / RNU1-122P* / RNU1-131P* / RNU1-148P* / RNA, U1 small nuclear 32, pseudogene* / RNA, U1 small n...ENSDARG0000010075692
RF00003 / RNU1-98P* / RNU1-20P* / RNU1-32P* / RNU1-44P* / RNU1-46P* / RNU1-59P* / RNU1-120P* / RNU1-122P* / RNU1-131P* / RNU1-148P* / RNA, U1 small nuclear 32, pseudogene* / RNA, U1 small n...ENSDARG0000010989492
RF00003 / RNU1-98P* / RNU1-20P* / RNU1-32P* / RNU1-44P* / RNU1-46P* / RNU1-59P* / RNU1-120P* / RNU1-122P* / RNU1-131P* / RNU1-148P* / RNA, U1 small nuclear 32, pseudogene* / RNA, U1 small n...ENSDARG0000011019692
RF00003 / RNU1-98P* / RNU1-20P* / RNU1-32P* / RNU1-44P* / RNU1-46P* / RNU1-59P* / RNU1-120P* / RNU1-122P* / RNU1-131P* / RNU1-148P* / RNA, U1 small nuclear 32, pseudogene* / RNA, U1 small n...ENSDARG0000011059492
RF00003 / RNU1-98P* / RNU1-20P* / RNU1-32P* / RNU1-44P* / RNU1-46P* / RNU1-59P* / RNU1-120P* / RNU1-122P* / RNU1-131P* / RNU1-148P* / RNA, U1 small nuclear 32, pseudogene* / RNA, U1 small n...ENSDARG0000011121792
RF00003 / RNU1-98P* / RNU1-20P* / RNU1-32P* / RNU1-44P* / RNU1-46P* / RNU1-59P* / RNU1-120P* / RNU1-122P* / RNU1-131P* / RNU1-148P* / RNA, U1 small nuclear 32, pseudogene* / RNA, U1 small n...ENSDARG0000011125592
RF00003 / RNU1-98P* / RNU1-20P* / RNU1-32P* / RNU1-44P* / RNU1-46P* / RNU1-59P* / RNU1-120P* / RNU1-122P* / RNU1-131P* / RNU1-148P* / RNA, U1 small nuclear 32, pseudogene* / RNA, U1 small n...ENSDARG0000011153292
RF00003 / RNU1-98P* / RNU1-20P* / RNU1-32P* / RNU1-44P* / RNU1-46P* / RNU1-59P* / RNU1-120P* / RNU1-122P* / RNU1-131P* / RNU1-148P* / RNA, U1 small nuclear 32, pseudogene* / RNA, U1 small n...ENSDARG0000011243092
RF00003 / RNU1-98P* / RNU1-20P* / RNU1-32P* / RNU1-44P* / RNU1-46P* / RNU1-59P* / RNU1-120P* / RNU1-122P* / RNU1-131P* / RNU1-148P* / RNA, U1 small nuclear 32, pseudogene* / RNA, U1 small n...ENSDARG0000011338592
RF00003 / RNU1-98P* / RNU1-20P* / RNU1-32P* / RNU1-44P* / RNU1-46P* / RNU1-59P* / RNU1-120P* / RNU1-122P* / RNU1-131P* / RNU1-148P* / RNA, U1 small nuclear 32, pseudogene* / RNA, U1 small n...ENSDARG0000011397392
RF00003 / RNU1-98P* / RNU1-20P* / RNU1-32P* / RNU1-44P* / RNU1-46P* / RNU1-59P* / RNU1-120P* / RNU1-122P* / RNU1-131P* / RNU1-148P* / RNA, U1 small nuclear 32, pseudogene* / RNA, U1 small n...ENSDARG0000011410192
RF00003 / RNU1-98P* / RNU1-20P* / RNU1-32P* / RNU1-44P* / RNU1-46P* / RNU1-59P* / RNU1-120P* / RNU1-122P* / RNU1-131P* / RNU1-148P* / RNA, U1 small nuclear 32, pseudogene* / RNA, U1 small n...ENSDARG0000011418692
RF00003 / RNU1-98P* / RNU1-20P* / RNU1-32P* / RNU1-44P* / RNU1-46P* / RNU1-59P* / RNU1-120P* / RNU1-122P* / RNU1-131P* / RNU1-148P* / RNA, U1 small nuclear 32, pseudogene* / RNA, U1 small n...ENSDARG0000011531292
RF00003 / RNU1-98P* / RNU1-20P* / RNU1-32P* / RNU1-44P* / RNU1-46P* / RNU1-59P* / RNU1-120P* / RNU1-122P* / RNU1-131P* / RNU1-148P* / RNA, U1 small nuclear 32, pseudogene* / RNA, U1 small n...ENSDARG0000011571992
RF00003 / RNU1-98P* / RNU1-20P* / RNU1-32P* / RNU1-44P* / RNU1-46P* / RNU1-59P* / RNU1-120P* / RNU1-122P* / RNU1-131P* / RNU1-148P* / RNA, U1 small nuclear 32, pseudogene* / RNA, U1 small n...ENSDARG0000011624792
RF00003 / RNU1-98P* / RNU1-20P* / RNU1-32P* / RNU1-44P* / RNU1-46P* / RNU1-59P* / RNU1-120P* / RNU1-122P* / RNU1-131P* / RNU1-148P* / RNA, U1 small nuclear 32, pseudogene* / RNA, U1 small n...ENSDARG0000011635992
RF00003 / RNU1-98P* / RNU1-20P* / RNU1-32P* / RNU1-44P* / RNU1-46P* / RNU1-59P* / RNU1-120P* / RNU1-122P* / RNU1-131P* / RNU1-148P* / RNA, U1 small nuclear 32, pseudogene* / RNA, U1 small n...ENSDARG0000011691092
RF00003 / RNU1-98P* / RNU1-20P* / RNU1-32P* / RNU1-44P* / RNU1-46P* / RNU1-59P* / RNU1-120P* / RNU1-122P* / RNU1-131P* / RNU1-148P* / RNA, U1 small nuclear 32, pseudogene* / RNA, U1 small n...ENSDARG0000011718491
RF00003 / RNU1-98P* / RNU1-20P* / RNU1-32P* / RNU1-44P* / RNU1-46P* / RNU1-59P* / RNU1-120P* / RNU1-122P* / RNU1-131P* / RNU1-148P* / RNA, U1 small nuclear 32, pseudogene* / RNA, U1 small n...ENSDARG0000009896189


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match