ENSDARG00000101032


Danio rerio

Features
Gene ID: ENSDARG00000101032
  
Biological name :iqcb1
  
Synonyms : iqcb1 / IQ motif containing B1
  
Possible biological names infered from orthology : IQ calmodulin-binding motif-containing protein 1 / Q15051 / Q8BP00
  
Species: Danio rerio
  
Chr. number: 6
Strand: -1
Band:
Gene start: 9225594
Gene end: 9236315
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000133063
Ensembl peptide - ENSDARP00000131399
NCBI entrez gene - 494079     See in Manteia.
NCBI entrez gene - 100006122     See in Manteia.
RefSeq - NM_001008622
RefSeq - NM_001111249
RefSeq Peptide - NP_001008622
RefSeq Peptide - NP_001104719
swissprot - Q5PRA5
swissprot - A0A0R4IC62
ZFIN ID - ZDB-GENE-041212-47
Ensembl - ENSDARG00000101032
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 IQCB1ENSGALG00000011655Gallus gallus
 IQCB1ENSG00000173226Homo sapiens
 Iqcb1ENSMUSG00000022837Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BX119909.1 / IQCB1* / Q15051* / Q8BP00* / IQ motif containing B1* / IQ calmodulin-binding motif-containing protein 1 *ENSDARG0000009343166


Protein motifs (from Interpro)
Interpro ID Name
 IPR000048  IQ motif, EF-hand binding site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR028765  IQ calmodulin-binding motif-containing protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0036372 opsin transport IMP
 biological_processGO:0048793 pronephros development IMP
 biological_processGO:0060271 cilium assembly IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0005516 calmodulin binding IEA


Pathways (from Reactome)
Pathway description
Anchoring of the basal body to the plasma membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain hydrocephalic , abnormal
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 ZFA:0000042 midbrain hindbrain boundary midbrain hindbrain boundary decreased thickness , abnormal
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 ZFA:0000151 pronephros pronephros cystic , abnormal
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 ZFA:0001094 whole organism whole organism curved dorsal , abnormal
whole organism curved ventral , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr