ENSDARG00000101144


Danio rerio

Features
Gene ID: ENSDARG00000101144
  
Biological name :zdhhc13
  
Synonyms : zdhhc13 / zinc finger, DHHC-type containing 13
  
Possible biological names infered from orthology : Q8IUH4 / Q9CWU2 / zinc finger, DHHC domain containing 13
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 16509201
Gene end: 16549089
  
Corresponding Affymetrix probe sets: Dr.2373.1.A1_at (Zebrafish Array)   Dr.6653.1.A1_at (Zebrafish Array)   NM_001008650_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000142710
Ensembl peptide - ENSDARP00000142901
NCBI entrez gene - 494107     See in Manteia.
RefSeq - NM_001008650
RefSeq Peptide - NP_001008650
swissprot - A0A1D5NST3
swissprot - A0A0R4IQZ2
ZFIN ID - ZDB-GENE-041212-79
Ensembl - ENSDARG00000101144
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ZDHHC13ENSGALG00000004085Gallus gallus
 Q8IUH4ENSG00000177054Homo sapiens
 Q9CWU2ENSMUSG00000030471Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zdhhc17 / zinc finger, DHHC-type containing 17 / Q80TN5* / Q8IUH5* / zinc finger, DHHC domain containing 17*ENSDARG0000007044142
si:ch211-223a10.1ENSDARG0000007522516
zdhhc12b / zinc finger, DHHC-type containing 12b / Q96GR4* / Q8VC90* / ZDHHC12* / zinc finger DHHC-type containing 12* / zinc finger, DHHC domain containing 12*ENSDARG0000005278710
zdhhc12a / zinc finger, DHHC-type containing 12a / Q96GR4* / Q8VC90* / ZDHHC12* / zinc finger DHHC-type containing 12* / zinc finger, DHHC domain containing 12*ENSDARG0000007663210


Protein motifs (from Interpro)
Interpro ID Name
 IPR001594  Palmitoyltransferase, DHHC domain
 IPR002110  Ankyrin repeat
 IPR020683  Ankyrin repeat-containing domain
 IPR030290  Palmitoyltransferase ZDHHC13


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030510 regulation of BMP signaling pathway IMP
 biological_processGO:0042665 regulation of ectodermal cell fate specification IMP
 biological_processGO:0060803 BMP signaling pathway involved in mesodermal cell fate specification IMP
 biological_processGO:1903830 magnesium ion transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0015095 magnesium ion transmembrane transporter activity IEA
 molecular_functionGO:0016409 palmitoyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016746 transferase activity, transferring acyl groups IEA
 molecular_functionGO:0019706 protein-cysteine S-palmitoyltransferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain increased size , abnormal
Show

 ZFA:0000037 anatomical structure anatomical structure increased amount , abnormal
anatomical structure decreased amount , abnormal
Show

 ZFA:0000041 mesoderm mesoderm dorsal region increased distribution , abnormal
Show

 ZFA:0000114 heart heart decreased functionality , abnormal
Show

 ZFA:0000155 somite somite distended , abnormal
Show

 ZFA:0001069 ventral fin fold ventral fin fold decreased thickness , abnormal
Show

 ZFA:0001114 head head increased size , abnormal
Show

 ZFA:0001120 neuroectoderm neuroectoderm increased distribution , abnormal
Show

 ZFA:0001376 presumptive ectoderm presumptive ectoderm ventral region decreased distribution , abnormal
Show

 ZFA:0001714 presumptive ventral mesoderm presumptive ventral mesoderm decreased distribution , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr