ENSDARG00000102307
Danio rerio transcription taf2 rna polymerase ii binding complex promoter regulation preinitiation assembly factor activity dna-templated sequence-specific involved dna initiation armadillo-like helical armadillo-type fold transcriptional nucleus tfiid core tbp-class protein chromatin regulatory region
Features Gene ID: ENSDARG00000102307 Biological name :taf2 Synonyms : Q32PW3 / taf2 / TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor Possible biological names infered from orthology : Q6P1X5 / TATA-box binding protein associated factor 2 Species: Danio rerio Chr. number: 16 Strand: 1 Band: Gene start: 9580699 Gene end: 9606284 Corresponding Affymetrix probe sets: Dr.20641.1.A1_at (Zebrafish Array) NM_001003835_at (Zebrafish Genome Array with custom cdf files) Cross references: Ensembl peptide - ENSDARP00000139157 NCBI entrez gene - 324486
See in Manteia .
RefSeq - XM_021466622 RefSeq - NM_001003835 RefSeq Peptide - NP_001003835 swissprot - Q32PW3 ZFIN ID - ZDB-GENE-030131-3207 Ensembl - ENSDARG00000102307
See expression report in BioGPS See gene description in Wikigenes See co-cited genes in PubMed Ortholog prediction (from Ensembl )
Paralog prediction (from Ensembl )No match Protein motifs (from Interpro )
Gene Ontology (GO ) nitrogen compound metabolic process biosynthetic process cellular metabolic process primary metabolic process organic substance metabolic process cellular component organization cellular component biogenesis nitrogen compound metabolic process biosynthetic process cellular metabolic process primary metabolic process organic substance metabolic process cellular component organization cellular component biogenesis nitrogen compound metabolic process biosynthetic process cellular metabolic process primary metabolic process organic substance metabolic process cellular component organization cellular component biogenesis nitrogen compound metabolic process biosynthetic process cellular metabolic process primary metabolic process organic substance metabolic process cellular component organization cellular component biogenesis nitrogen compound metabolic process biosynthetic process cellular metabolic process primary metabolic process organic substance metabolic process cellular component organization cellular component biogenesis nitrogen compound metabolic process biosynthetic process cellular metabolic process primary metabolic process organic substance metabolic process cellular component organization cellular component biogenesis nitrogen compound metabolic process biosynthetic process cellular metabolic process primary metabolic process organic substance metabolic process cellular component organization cellular component biogenesis nitrogen compound metabolic process biosynthetic process cellular metabolic process primary metabolic process organic substance metabolic process cellular component organization cellular component biogenesis nitrogen compound metabolic process biosynthetic process cellular metabolic process primary metabolic process organic substance metabolic process cellular component organization cellular component biogenesis nitrogen compound metabolic process biosynthetic process cellular metabolic process primary metabolic process organic substance metabolic process cellular component organization cellular component biogenesis nitrogen compound menitrogen compound metabolic process biosynthetic processbiosynthetic process cellular metabolic pcellular metabolic process primary metabolic prprimary metabolic process organic substance meorganic substance metabolic process cellular component ocellular component organization cellular component bcellular component biogenesis DNA-binding transcription factor activity transcription factor activity, protein binding chromatin binding organic cyclic compound binding heterocyclic compound binding DNA-binding transcription factor activity transcription factor activity, protein binding chromatin binding organic cyclic compound binding heterocyclic compound binding DNA-binding transcription factor activity transcription factor activity, protein binding chromatin binding organic cyclic compound binding heterocyclic compound binding DNA-binding transcription factor activity transcription factor activity, protein binding chromatin binding organic cyclic compound binding heterocyclic compound binding DNA-binding transcription factor activity transcription factor activity, protein binding chromatin binding organic cyclic compound binding heterocyclic compound binding DNA-binding transcription factor activity transcription factor activity, protein binding chromatin binding organic cyclic compound binding heterocyclic compound binding DNA-binding transcription factor activity transcription factor activity, protein binding chromatin binding organic cyclic compound binding heterocyclic compound binding DNA-binding transcription factor activity transcription factor activity, protein binding chromatin binding organic cyclic compound binding heterocyclic compound binding DNA-binding transcription factor activity transcription factor activity, protein binding chromatin binding organic cyclic compound binding heterocyclic compound binding DNA-binding transcription factor activity transcription factor activity, protein binding chromatin binding organic cyclic compound binding heterocyclic compound binding DNA-binding transcription faDNA-binding transcription factor activity transcription factor activittranscription factor activity, protein binding chromatin bindingchromatin binding organic cyclic compound bindorganic cyclic compound binding heterocyclic compound bindinheterocyclic compound binding cell organelle protein-containing complex membrane-enclosed lumen cell organelle protein-containing complex membrane-enclosed lumen cell organelle protein-containing complex membrane-enclosed lumen cell organelle protein-containing complex membrane-enclosed lumen cell organelle protein-containing complex membrane-enclosed lumen cell organelle protein-containing complex membrane-enclosed lumen cell organelle protein-containing complex membrane-enclosed lumen cell organelle protein-containing complex membrane-enclosed lumen cell organelle protein-containing complex membrane-enclosed lumen cell organelle protein-containing complex membrane-enclosed lumen cellcell organelleorganelle protein-containing complexprotein-containing complex membrane-enclosed lumenmembrane-enclosed lumen
Pathways (from Reactome )
Phenotype (from MGI , Zfin or HPO ) ZFA:0000054 pericardium pericardium edematous , abnormal
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ZFA:0000084 yolk yolk grey , abnormal yolk swollen , abnormal
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ZFA:0000107 eye eye decreased size , abnormal
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ZFA:0000112 gut gut quality , abnormal gut hypoplastic , abnormal
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ZFA:0000114 heart heart quality , abnormal
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ZFA:0000123 liver liver quality , abnormal liver hypoplastic , abnormal
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ZFA:0001114 head head decreased size , abnormal
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ZFA:0001115 trunk trunk necrotic , abnormal
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Interacting proteins (from Reactome )No match
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