ENSDARG00000102452


Danio rerio

Features
Gene ID: ENSDARG00000102452
  
Biological name :eif3ha
  
Synonyms : eif3ha / eukaryotic translation initiation factor 3, subunit H, a / Q6AXJ2
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 48282321
Gene end: 48400639
  
Corresponding Affymetrix probe sets: Dr.6332.1.S1_at (Zebrafish Array)   NM_001003763_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000129950
NCBI entrez gene - 445306     See in Manteia.
RefSeq - NM_001003763
RefSeq Peptide - NP_001003763
swissprot - Q6AXJ2
ZFIN ID - ZDB-GENE-040808-19
Ensembl - ENSDARG00000102452
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
eif3hb / Q5PR67 / eukaryotic translation initiation factor 3, subunit H, bENSDARG0000003611687
FO704771.1 / EIF3H* / O15372* / eukaryotic translation initiation factor 3 subunit H*ENSDARG0000011696324


Protein motifs (from Interpro)
Interpro ID Name
 IPR000555  JAB1/MPN/MOV34 metalloenzyme domain
 IPR027524  Eukaryotic translation initiation factor 3 subunit H


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001944 vasculature development IMP
 biological_processGO:0006412 translation IEA
 biological_processGO:0006413 translational initiation ISS
 biological_processGO:0006417 regulation of translation IMP
 biological_processGO:0007420 brain development IMP
 biological_processGO:0048882 lateral line development IMP
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005852 eukaryotic translation initiation factor 3 complex ISS
 molecular_functionGO:0003743 translation initiation factor activity ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain degenerate , abnormal
Show

 ZFA:0000106 extension extension aplastic , abnormal
Show

 ZFA:0000940 posterior lateral line neuromast posterior lateral line neuromast decreased amount , abnormal
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 ZFA:0001115 trunk trunk bent , abnormal
Show

 ZFA:0001117 post-vent region post-vent region curled , abnormal
post-vent region necrotic , abnormal
Show

 ZFA:0001285 intersegmental vessel intersegmental vessel spatial pattern , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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