ENSDARG00000102827


Danio rerio

Features
Gene ID: ENSDARG00000102827
  
Biological name :ubfd1
  
Synonyms : ubfd1 / ubiquitin family domain containing 1
  
Possible biological names infered from orthology : O14562 / Q78JW9
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 43942032
Gene end: 43959873
  
Corresponding Affymetrix probe sets: Dr.17009.1.S1_at (Zebrafish Array)   Dr.420.1.A1_at (Zebrafish Array)   NM_001082830_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000133491
Ensembl peptide - ENSDARP00000146521
Ensembl peptide - ENSDARP00000140716
Ensembl peptide - ENSDARP00000137446
NCBI entrez gene - 562437     See in Manteia.
RefSeq - NM_001082830
RefSeq Peptide - NP_001076299
swissprot - A3KNV8
swissprot - A0A0R4IYY8
swissprot - A0A0R4IIH0
ZFIN ID - ZDB-GENE-050506-90
Ensembl - ENSDARG00000102827
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 UBFD1ENSGALG00000006117Gallus gallus
 UBFD1ENSG00000103353Homo sapiens
 Ubfd1ENSMUSG00000030870Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000626  Ubiquitin domain
 IPR019954  Ubiquitin conserved site
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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