ENSDARG00000103320


Danio rerio

Features
Gene ID: ENSDARG00000103320
  
Biological name :lclat1
  
Synonyms : lclat1 / lysocardiolipin acyltransferase 1 / Q6NYV8
  
Possible biological names infered from orthology : Q3UN02 / Q6UWP7
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 51956397
Gene end: 51963460
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000138738
NCBI entrez gene - 406554     See in Manteia.
RefSeq - NM_213270
RefSeq Peptide - NP_998435
swissprot - Q6NYV8
ZFIN ID - ZDB-GENE-081211-2
Ensembl - ENSDARG00000103320
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LCLAT1ENSGALG00000009056Gallus gallus
 LCLAT1ENSG00000172954Homo sapiens
 Lclat1ENSMUSG00000054469Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
agpat4 / 1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta) / Q8K4X7* / Q9NRZ5* / 1-acylglycerol-3-phosphate O-acyltransferase 4* / 1-acyl-sn-glyc...ENSDARG0000006904424
agpat3 / 1-acylglycerol-3-phosphate O-acyltransferase 3 / Q9D517* / Q9NRZ7* / 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma *ENSDARG0000003654923
agpat5 / 1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon) / Q9D1E8* / Q9NUQ2* / 1-acylglycerol-3-phosphate O-acyltransferase 5* / 1-acyl-sn-gl...ENSDARG0000006318720


Protein motifs (from Interpro)
Interpro ID Name
 IPR002123  Phospholipid/glycerol acyltransferase
 IPR032098  Acyltransferase, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001885 endothelial cell development IMP
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0008654 phospholipid biosynthetic process IEA
 biological_processGO:0016024 CDP-diacylglycerol biosynthetic process IEA
 biological_processGO:0035162 embryonic hemopoiesis IMP
 biological_processGO:0060217 hemangioblast cell differentiation IMP
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016746 transferase activity, transferring acyl groups IEA


Pathways (from Reactome)
Pathway description
Acyl chain remodeling of CL
Synthesis of PA


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000033 intermediate cell mass of mesoderm intermediate cell mass of mesoderm decreased amount , abnormal
Show

 ZFA:0001079 blood vasculature blood vasculature decreased amount , abnormal
Show

 ZFA:0001320 endocardium endocardium aplastic , abnormal
Show

 ZFA:0009044 blood cell blood cell decreased amount , abnormal
Show

 ZFA:0009065 endothelial cell endothelial cell decreased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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