ENSDARG00000103546


Danio rerio

Features
Gene ID: ENSDARG00000103546
  
Biological name :purbb
  
Synonyms : purbb / purine-rich element binding protein Bb / Q6PHK6
  
Possible biological names infered from orthology : O35295 / PURB / purine rich element binding protein B / Q96QR8
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 44979533
Gene end: 44981295
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000136139
NCBI entrez gene - 393519     See in Manteia.
RefSeq - NM_200547
RefSeq Peptide - NP_956841
swissprot - Q6PHK6
ZFIN ID - ZDB-GENE-040426-1478
Ensembl - ENSDARG00000103546
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PURBENSG00000146676Homo sapiens
 PurbENSMUSG00000094483Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
purba / purine-rich element binding protein Ba / PURB* / O35295* / Q96QR8* / purine rich element binding protein B*ENSDARG0000006882289
puraa / purine-rich element binding protein Aa / PURA* / Q00577* / P42669* / purine rich element binding protein A* / Transcriptional activator protein Pur-alpha *ENSDARG0000006759169
purab / purine-rich element binding protein Ab / PURA* / Q00577* / P42669* / purine rich element binding protein A* / Transcriptional activator protein Pur-alpha *ENSDARG0000009961468
purg / purine-rich element binding protein G / Q8R4E6* / Q9UJV8* / Purine-rich element-binding protein gamma *ENSDARG0000009918751


Protein motifs (from Interpro)
Interpro ID Name
 IPR006628  Purine-rich element binding protein family
 IPR030499  Purine-rich element-binding protein beta


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0008283 cell proliferation IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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