ENSDARG00000103887


Danio rerio

Features
Gene ID: ENSDARG00000103887
  
Biological name :carmil1
  
Synonyms : capping protein regulator and myosin 1 linker 1 / carmil1
  
Possible biological names infered from orthology : F-actin-uncapping protein LRRC16A / Q5VZK9 / Q6EDY6
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 156757
Gene end: 164884
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000134615
Ensembl peptide - ENSDARP00000141864
NCBI entrez gene - 101883470     See in Manteia.
RefSeq - XM_021468201
swissprot - A0A0R4IZD6
swissprot - A0A0R4IK33
ZFIN ID - ZDB-GENE-081104-77
Ensembl - ENSDARG00000103887
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CARMIL1ENSGALG00000013605Gallus gallus
 Q5VZK9ENSG00000079691Homo sapiens
 Q6EDY6ENSMUSG00000021338Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
carmil2 / capping protein regulator and myosin 1 linker 2 / Q3V3V9* / Q6F5E8* / Mus musculus capping protein regulator and myosin 1 linker 2 (Carmil2), mRNA.*ENSDARG0000005663944
carmil3 / capping protein regulator and myosin 1 linker 3 / Q3UFQ8* / Q8ND23* / Capping protein, Arp2/3 and myosin-I linker protein 3 *ENSDARG0000008699041


Protein motifs (from Interpro)
Interpro ID Name
 IPR029764  Leucine-rich repeat-containing protein 16A


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030335 positive regulation of cell migration IEA
 biological_processGO:0051638 barbed-end actin filament uncapping IEA
 biological_processGO:1902745 positive regulation of lamellipodium organization IEA
 biological_processGO:2000813 negative regulation of barbed-end actin filament capping IEA
 cellular_componentGO:0030027 lamellipodium IEA


Pathways (from Reactome)
Pathway description
Factors involved in megakaryocyte development and platelet production


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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