ENSDARG00000104080


Danio rerio

Features
Gene ID: ENSDARG00000104080
  
Biological name :pcdh2ab12
  
Synonyms : pcdh2ab12 / protocadherin 2 alpha b 12
  
Possible biological names infered from orthology : O88689 / PCDHA1 / PCDHA10 / PCDHA11 / PCDHA12 / PCDHA13 / PCDHA2 / PCDHA3 / PCDHA4 / PCDHA5 / PCDHA6 / PCDHA7 / PCDHA8 / PCDHA9 / protocadherin alpha 1 / protocadherin alpha 10 / protocadherin alpha 11 / protocadherin alpha 12 / protocadherin alpha 13 / protocadherin alpha 2 / protocadherin alpha 3 / protocadherin alpha 4 / protocadherin alpha 5 / protocadherin alpha 6 / protocadherin alpha 7 / protocadherin alpha 8 / protocadherin alpha 9 / Q91Y11 / Q91Y13 / Q91Y20 / Q9UN72 / Q9UN73 / Q9UN74 / Q9UN75 / Q9Y5H5 / Q9Y5H6 / Q9Y5H7 / Q9Y5H8 / Q9Y5H9 / Q9Y5I0 / Q9Y5I1 / Q9Y5I2 / Q9Y5I3
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 2123123
Gene end: 2187202
  
Corresponding Affymetrix probe sets: Dr.19866.1.S1_at (Zebrafish Array)   NM_001009591_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000130636
NCBI entrez gene - 493600     See in Manteia.
RefSeq - NM_001009591
RefSeq Peptide - NP_001009591
swissprot - A0A0N4STQ6
ZFIN ID - ZDB-GENE-041118-11
Ensembl - ENSDARG00000104080
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PCDHA2ENSGALG00000043142Gallus gallus
 PCDHA1ENSG00000204970Homo sapiens
 PCDHA2ENSG00000204969Homo sapiens
 PCDHA3ENSG00000255408Homo sapiens
 PCDHA4ENSG00000204967Homo sapiens
 PCDHA5ENSG00000204965Homo sapiens
 PCDHA6ENSG00000081842Homo sapiens
 PCDHA7ENSG00000204963Homo sapiens
 PCDHA8ENSG00000204962Homo sapiens
 PCDHA9ENSG00000204961Homo sapiens
 Q9UN75ENSG00000251664Homo sapiens
 Q9Y5I0ENSG00000239389Homo sapiens
 Q9Y5I1ENSG00000249158Homo sapiens
 Q9Y5I2ENSG00000250120Homo sapiens
 O88689ENSMUSG00000104252Mus musculus
 Pcdha1ENSMUSG00000103442Mus musculus
 Pcdha11ENSMUSG00000102206Mus musculus
 Pcdha12ENSMUSG00000103310Mus musculus
 Pcdha5ENSMUSG00000103092Mus musculus
 Pcdha6ENSMUSG00000103707Mus musculus
 Pcdha7ENSMUSG00000104318Mus musculus
 Pcdha8ENSMUSG00000103800Mus musculus
 Pcdha9ENSMUSG00000103770Mus musculus
 Q91Y20ENSMUSG00000007440Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pcdh2ab1 / pcdh2ab8 / protocadherin 2 alpha b 8 / PCDHA3* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* /...ENSDARG0000008987477
pcdh2ab6 / protocadherin 2 alpha b 6 / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* / ...ENSDARG0000009104377
pcdh2ab3 / protocadherin 2 alpha b 3 / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* / ...ENSDARG0000010271977
pcdh2ab2 / protocadherin 2 alpha b2 / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* / Q...ENSDARG0000003769175
pcdh2ab2 / protocadherin 2 alpha b2 / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* / Q...ENSDARG0000009946875
pcdh2ab1 / protocadherin 2 alpha b 1 / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* / ...ENSDARG0000007190472
si:dkey-262j3.7 / PCDHA1* / PCDHA5* / O88689* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* / Q9Y5H9* / Q9Y5I0* / Q...ENSDARG0000010414168
pcdh1a3 / protocadherin 1 alpha 3 / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* / Q9Y...ENSDARG0000010360266
pcdh1a3 / pcdh1a6 / protocadherin 1 alpha 3 / PCDHA3* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y...ENSDARG0000010459866
si:dkeyp-115d7.2 / PCDHA1* / PCDHA5* / O88689* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* / Q9Y5H9* / Q9Y5I0* / ...ENSDARG0000008929761
pcdh2aa1 / protocadherin 2 alpha a 1 / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* / ...ENSDARG0000003769548
pcdh2aa15 / protocadherin 2 alpha a 15 / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* ...ENSDARG0000008813648
pcdh10b / protocadherin 10bENSDARG0000010282439
BX957322.3ENSDARG0000010735339
pcdh1g9 / protocadherin 1 gamma 9 / PCDHA4* / O88689* / PCDHA1* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* / Q9Y...ENSDARG0000005751937
si:ch73-379j16.2 / PCDHA1* / PCDHA5* / O88689* / PCDHA9* / Q91Y11* / Q91Y13* / Q91Y20* / Q9UN72* / Q9UN73* / Q9UN74* / Q9UN75* / Q9Y5H5* / Q9Y5H6* / Q9Y5H7* / Q9Y5H8* / Q9Y5H9* / Q9Y5I0* / ...ENSDARG0000009953533
si:ch73-233f7.8ENSDARG0000010042432
pcdh7b / protocadherin 7b / PCDH7* / O60245* / protocadherin 7*ENSDARG0000006061028
pcdh1a / protocadherin 1a / PCDH1* / Q08174* / protocadherin 1*ENSDARG0000006272027
pcdh7a / protocadherin 7aENSDARG0000007889827


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR031904  Cadherin, C-terminal catenin-binding domain
 IPR032455  Cadherin, cytoplasmic C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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