ENSDARG00000104483


Danio rerio

Features
Gene ID: ENSDARG00000104483
  
Biological name :gipc1
  
Synonyms : gipc1 / GIPC PDZ domain containing family, member 1
  
Possible biological names infered from orthology : O14908 / PDZ domain-containing protein GIPC1 / Q9Z0G0
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 49126103
Gene end: 49138004
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000134004
NCBI entrez gene - 445568     See in Manteia.
swissprot - Q6B337
ZFIN ID - ZDB-GENE-060726-1
Ensembl - ENSDARG00000104483
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GIPC1ENSG00000123159Homo sapiens
 Gipc1ENSMUSG00000019433Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gipc2 / GIPC PDZ domain containing family, member 2 / Q8TF65* / Q9Z2H7* / PDZ domain-containing protein GIPC2 *ENSDARG0000000948867
gipc3 / GIPC PDZ domain containing family, member 3 / Q8R5M0* / Q8TF64* / PDZ domain-containing protein GIPC3 *ENSDARG0000005307461


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR017379  PDZ domain-containing protein GIPC1/2/3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000165 MAPK cascade IEA
 biological_processGO:0001525 angiogenesis IMP
 biological_processGO:0001946 lymphangiogenesis IMP
 biological_processGO:0048844 artery morphogenesis IMP
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0031982 vesicle IBA
 molecular_functionGO:0004707 MAP kinase activity IMP


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000014 dorsal aorta dorsal aorta angiogenic sprout immature , abnormal
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 ZFA:0000477 posterior cardinal vein posterior cardinal vein vascular sprouts decreased amount , abnormal
posterior cardinal vein vascular sprouts absent , abnormal
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 ZFA:0001285 intersegmental vessel intersegmental vessel absent , abnormal
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 ZFA:0005025 dorsal longitudinal anastomotic vessel dorsal longitudinal anastomotic vessel absent , abnormal
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 ZFA:0005110 thoracic duct thoracic duct absent , abnormal
thoracic duct decreased length , abnormal
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 ZFA:0009395 vascular lymphangioblast vascular lymphangioblast decreased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr