ENSDARG00000105286
Danio rerio | |
Features
| Gene ID: | ENSDARG00000105286 | | | | | Biological name : | ddx54 | | | | | Synonyms : | ddx54 / DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 | | | | | Possible biological names infered from orthology : | ATP-dependent RNA helicase DDX54 / DEAD-box helicase 54 / Q8K4L0 / Q8TDD1 | | | | | Species: | Danio rerio | | | | | Chr. number: | 5 | | Strand: | 1 | | Band: | | | Gene start: | 72194444 | | Gene end: | 72207275 | | | | | Corresponding Affymetrix probe sets: | Dr.18320.1.S1_at (Zebrafish Array) | | | | | Cross references: | Ensembl peptide - ENSDARP00000138094
NCBI entrez gene - 286777
See in Manteia.
swissprot - Q8JGR2
ZFIN ID - ZDB-GENE-021220-2
Ensembl - ENSDARG00000105286
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See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed
Ortholog prediction (from Ensembl)
Paralog prediction (from Ensembl)
No match
Protein motifs (from Interpro)
| IPR000629 | ATP-dependent RNA helicase DEAD-box, conserved site | | IPR001650 | Helicase, C-terminal | | IPR011545 | DEAD/DEAH box helicase domain | | IPR012541 | DBP10, C-terminal | | IPR014001 | Helicase superfamily 1/2, ATP-binding domain | | IPR014014 | RNA helicase, DEAD-box type, Q motif | | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
Gene Ontology (GO)
Pathways (from Reactome)
No match
Phenotype (from MGI, Zfin or HPO)
| ZFA:0000008 | brain | brain necrotic , abnormal |
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| | ZFA:0000012 | central nervous system | central nervous system necrotic , abnormal |
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| | ZFA:0000107 | eye | eye decreased size , abnormal |
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| | ZFA:0000112 | gut | gut hypoplastic , abnormal |
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| | ZFA:0000123 | liver | liver hypoplastic , abnormal |
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| | ZFA:0001114 | head | head decreased size , abnormal |
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Interacting proteins (from Reactome)
No match
0 s.
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