ENSDARG00000105296


Danio rerio

Features
Gene ID: ENSDARG00000105296
  
Biological name :LO017739.1
  
Synonyms : LO017739.1
  
Possible biological names infered from orthology : adaptor related protein complex 3 beta 2 subunit / AP3B2 / AP-3 complex subunit beta-2 / Q13367 / Q9JME5
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 5702094
Gene end: 5740373
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000134685
Ensembl peptide - ENSDARP00000141031
swissprot - A0A0G2KQL4
swissprot - A0A0G2L8C2
Ensembl - ENSDARG00000105296
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000035202Gallus gallus
 AP3B2ENSG00000103723Homo sapiens
 Ap3b2ENSMUSG00000062444Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AP3B1 / adaptor related protein complex 3 beta 1 subunit / O00203*ENSDARG0000010008242
CU929160.1 / AP3B1* / O00203* / adaptor related protein complex 3 beta 1 subunit*ENSDARG0000011005612


Protein motifs (from Interpro)
Interpro ID Name
 IPR002553  Clathrin/coatomer adaptor, adaptin-like, N-terminal
 IPR011989  Armadillo-like helical
 IPR013041  Clathrin adaptor, appendage, Ig-like subdomain superfamily
 IPR016024  Armadillo-type fold
 IPR026739  AP complex subunit beta
 IPR026740  AP-3 complex subunit beta
 IPR029390  AP-3 complex subunit beta, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030117 membrane coat IEA
 cellular_componentGO:0030123 AP-3 adaptor complex IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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