ENSDARG00000105382


Danio rerio
histonehbindingproteinnucleosometataboxassociatedfactortafhistone-foldconservedsitecenp-tfoldassemblydna-templatedtranscriptioninitiationnucleuschromosomednaheterodimerizationactivity

Features
Gene ID: ENSDARG00000105382
  
Biological name :zgc:165555
  
Synonyms : zgc:165555
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 6352164
Gene end: 6352569
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000142261
NCBI entrez gene - 100004395     See in Manteia.
NCBI entrez gene - 100126027     See in Manteia.
NCBI entrez gene - 100150038     See in Manteia.
NCBI entrez gene - 100329358     See in Manteia.
NCBI entrez gene - 100331412     See in Manteia.
NCBI entrez gene - 100332668     See in Manteia.
NCBI entrez gene - 100333562     See in Manteia.
NCBI entrez gene - 101882398     See in Manteia.
NCBI entrez gene - 101886781     See in Manteia.
NCBI entrez gene - 103908680     See in Manteia.
NCBI entrez gene - 103908712     See in Manteia.
NCBI entrez gene - 108181627     See in Manteia.
NCBI entrez gene - 560380     See in Manteia.
NCBI entrez gene - 562770     See in Manteia.
NCBI entrez gene - 794549     See in Manteia.
NCBI entrez gene - 100004171     See in Manteia.
swissprot - A3KPR4
ZFIN ID - ZDB-GENE-070620-17
Ensembl - ENSDARG00000105382
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:165555 / P62805* / HIST2H4B* / histone cluster 2 H4 family member b*ENSDARG00000061547100
zgc:165555ENSDARG00000099920100
zgc:165555ENSDARG00000101249100
zgc:165555ENSDARG00000105318100
zgc:165555ENSDARG00000105352100
zgc:165555ENSDARG00000105353100
zgc:165555 / P62805* / P62806* / HIST2H4A* / Hist1h4a* / Histone H4 * / histone cluster 2 H4 family member a*ENSDARG00000105355100
zgc:165555ENSDARG00000105376100
zgc:165555 / P62806* / Hist1h4h* / Histone H4 *ENSDARG00000105409100
zgc:165555ENSDARG00000105482100
zgc:165555ENSDARG00000110035100
zgc:165555ENSDARG00000110152100
HIST1H4I / zgc:165555 / P62805* / histone cluster 1 H4 family member i*ENSDARG00000110812100
zgc:165555ENSDARG00000111165100
zgc:165555ENSDARG00000111247100
zgc:165555ENSDARG00000111494100
zgc:165555ENSDARG00000111501100
zgc:165555ENSDARG00000111619100
zgc:165555ENSDARG00000111753100
zgc:165555ENSDARG00000112491100


Protein motifs (from Interpro)
Interpro ID Name
 IPR001951  Histone H4
 IPR004823  TATA box binding protein associated factor (TAF)
 IPR009072  Histone-fold
 IPR019809  Histone H4, conserved site
 IPR035425  CENP-T/Histone H4, histone fold


Gene Ontology (GO)
cellular component organizationcellular component biogenesisnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcellular component biogenesisnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcellular component biogenesisnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcellular component biogenesisnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcellular component biogenesisnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcellular component biogenesisnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcellular component biogenesisnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcellular component biogenesisnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcellular component biogenesisnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component organizationcellular component biogenesisnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processcellular component ocellular component organizationcellular component bcellular component biogenesisnitrogen compound menitrogen compound metabolic processbiosynthetic processbiosynthetic processcellular metabolic pcellular metabolic processprimary metabolic prprimary metabolic processorganic substance meorganic substance metabolic process
organic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingheterocyclic compound bindingprotein bindingprotein binding
cellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellprotein-containing complexorganellecellcellprotein-containing complexprotein-containing complexorganelleorganelle
TypeGO IDTermEv.Code
 biological_processGO:0006334 nucleosome assembly IEA
 biological_processGO:0006352 DNA-templated transcription, initiation IEA
 cellular_componentGO:0000786 nucleosome IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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