ENSDARG00000105508


Danio rerio

Features
Gene ID: ENSDARG00000105508
  
Biological name :si:dkey-23a13.21
  
Synonyms : si:dkey-23a13.21
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 5976613
Gene end: 5977242
  
Corresponding Affymetrix probe sets: Dr.18971.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000142201
NCBI entrez gene - 368227     See in Manteia.
swissprot - A0A140LG23
ZFIN ID - ZDB-GENE-160113-53
Ensembl - ENSDARG00000105508
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:173552ENSDARG0000005173799
Q4QRF4 / zgc:113983ENSDARG0000006894199
Q4QRF4 / hist2h3c / histone cluster 2, H3cENSDARG0000009415499
Q4QRF4 / CU459186.1 / Histone H3.2 ENSDARG0000009897099
Q4QRF4 / CU459186.2 / Histone H3.2 ENSDARG0000010172099
Q4QRF4 / CU459186.3 / Histone H3.2 ENSDARG0000010381999
zgc:173552ENSDARG0000010534599
Q4QRF4 / FP325123.1 / Histone H3.2 ENSDARG0000010535999
Q4QRF4 / CU457819.2 / Histone H3.2 ENSDARG0000010537499
Q4QRF4 / CU457819.3 / Histone H3.2 / Q71DI3* / HIST2H3C* / histone cluster 2 H3 family member c*ENSDARG0000010541899
Q4QRF4 / CU457819.4 / Histone H3.2 ENSDARG0000010545999
Q4QRF4 / FP325123.2 / Histone H3.2 / P04908* / P84228* / Hist1h3e* / HIST1H2AB* / HIST1H2AE* / histone cluster 1 H2A family member e* / histone cluster 1 H2A family member b*ENSDARG0000010548499
zgc:173552ENSDARG0000011090999
zgc:173552ENSDARG0000011139699
zgc:173552ENSDARG0000011213199
zgc:173552ENSDARG0000011217599
CR762436.1 / P84228* / Hist2h3c1* / Histone H3.2 *ENSDARG0000011237599
si:dkey-108k21.24ENSDARG0000011264799
CR762436.2 / Q71DI3* / HIST2H3D* / histone cluster 2 H3 family member d*ENSDARG0000011296799
CR354435.5 / P84228* / Hist2h3c2* / Histone H3.2 *ENSDARG0000011416999


Protein motifs (from Interpro)
Interpro ID Name
 IPR000164  Histone H3/CENP-A
 IPR007125  Histone H2A/H2B/H3
 IPR009072  Histone-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0000786 nucleosome IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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