ENSDARG00000105562


Danio rerio

Features
Gene ID: ENSDARG00000105562
  
Biological name :si:dkey-23i12.7
  
Synonyms : si:dkey-23i12.7
  
Possible biological names infered from orthology : basic leucine zipper ATF-like transcription factor 2 / BATF2 / Mus musculus basic leucine zipper transcription factor, ATF-like 2 (Batf2), transcript variant 2, mRNA. / Q8N1L9 / Q8R1H8
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 25049545
Gene end: 25058145
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000142835
Ensembl peptide - ENSDARP00000142863
NCBI entrez gene - 100007087     See in Manteia.
swissprot - A0A1D5NSP6
ZFIN ID - ZDB-GENE-160728-52
Ensembl - ENSDARG00000105562
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BATF2ENSG00000168062Homo sapiens
 Batf2ENSMUSG00000039699Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
batf / F1QW76 / basic leucine zipper transcription factor, ATF-like / Q16520* / O35284* / basic leucine zipper ATF-like transcription factor* / Basic leucine zipper transcriptional factor ATF-like *ENSDARG0000001181825
batf3 / basic leucine zipper transcription factor, ATF-like 3 / Q9D275* / Q9NR55* / basic leucine zipper ATF-like transcription factor 3* / Basic leucine zipper transcriptional factor ATF-like 3 *ENSDARG0000004257725


Protein motifs (from Interpro)
Interpro ID Name
 IPR000837  AP-1 transcription factor
 IPR004827  Basic-leucine zipper domain
 IPR029818  Basic leucine zipper transcriptional factor ATF-like 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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