ENSDARG00000110874


Danio rerio

Features
Gene ID: ENSDARG00000110874
  
Biological name :CR847537.1
  
Synonyms : CR847537.1
  
Possible biological names infered from orthology : ELFN2 / extracellular leucine rich repeat and fibronectin type III domain containing 2 / Mus musculus leucine rich repeat and fibronectin type III, extracellular 2 (Elfn2), transcript variant 1, mRNA. / Q5R3F8 / Q68FM6
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 33570583
Gene end: 33574576
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000145081
Ensembl peptide - ENSDARP00000151730
Ensembl peptide - ENSDARP00000152131
Ensembl peptide - ENSDARP00000153201
Ensembl peptide - ENSDARP00000153733
Ensembl - ENSDARG00000110874
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ELFN2ENSGALG00000012446Gallus gallus
 ELFN2ENSG00000166897Homo sapiens
 Elfn2ENSMUSG00000043460Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
elfn1b / extracellular leucine-rich repeat and fibronectin type III domain containing 1b / ELFN1* / P0C7U0* / Q8C8T7* / Protein ELFN1 * / extracellular leucine rich repeat and fibronectin t...ENSDARG0000007437247
elfn2a / extracellular leucine-rich repeat and fibronectin type III domain containing 2a / ELFN2* / Q5R3F8* / Q68FM6* / extracellular leucine rich repeat and fibronectin type III domain con...ENSDARG0000007760939
slitrk5b / SLIT and NTRK-like family, member 5b / Q810B7* / O94991* / SLITRK5* / SLIT and NTRK-like protein 5 * / SLIT and NTRK like family member 5*ENSDARG0000007415314
slitrk3a / SLIT and NTRK-like family, member 3a / O94933* / Q810B9* / SLITRK3* / SLIT and NTRK like family member 3* / Mus musculus SLIT and NTRK-like family, member 3 (Slitrk3), transcript...ENSDARG0000007812314
slitrk5a / SLIT and NTRK-like family, member 5a / O94991* / SLITRK5* / SLIT and NTRK like family member 5*ENSDARG0000010335914
slitrk3b / SLIT and NTRK-like family, member 3b / O94933* / Q810B9* / SLITRK3* / SLIT and NTRK like family member 3* / Mus musculus SLIT and NTRK-like family, member 3 (Slitrk3), transcript...ENSDARG0000007473913
slitrk4 / SLIT and NTRK-like family, member 4 / Q810B8* / Q8IW52*ENSDARG0000007978113
slitrk6 / SLIT and NTRK-like family, member 6 / Q9H5Y7*ENSDARG0000009876913
slitrk2 / SLIT and NTRK-like family, member 2 / O96002* / Q810C0* / Q9H156*ENSDARG0000000663612
si:ch73-185c24.2 / LRRC19* / Q8BZT5* / Q9H756* / leucine rich repeat containing 19* / Leucine-rich repeat-containing protein 19 *ENSDARG000000969084


Protein motifs (from Interpro)
Interpro ID Name
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR013783  Immunoglobulin-like fold
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr