ENSDARG00000111935


Danio rerio

Features
Gene ID: ENSDARG00000111935
  
Biological name :BX769173.2
  
Synonyms : BX769173.2
  
Possible biological names infered from orthology : Q8C0E3 / Q96LD4 / TRIM47 / Trim80 / tripartite motif containing 47 / tripartite motif-containing 80
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 49010987
Gene end: 49015203
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000152143
Ensembl - ENSDARG00000111935
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRIM47ENSGALG00000028301Gallus gallus
 Q96LD4ENSG00000132481Homo sapiens
 Q8C0E3ENSMUSG00000020773Mus musculus
 Trim80ENSMUSG00000070332Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ftr42 / finTRIM family, member 42 / Q96LD4* / TRIM47* / tripartite motif containing 47*ENSDARG0000011499277
BX769173.1 / Q96LD4* / TRIM47* / tripartite motif containing 47*ENSDARG0000011096074
ftr57 / finTRIM family, member 57 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000007436072
ftr58 / finTRIM family, member 58 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000007123867
ftr59 / finTRIM family, member 59 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000009586466
ftr51 / finTRIM family, member 51 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000002910562
ftr56 / finTRIM family, member 56 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000003095461
ftr95 / finTRIM family, member 95 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000007373559
ftr16 / ftr96 / finTRIM family, member 96 / Q96LD4* / Q8C0E3* / TRIM47* / Trim80* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000003204358
ftr34 / finTRIM family, member 34 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000007961458
ftr36 / finTRIM family, member 36 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000008705758
ftr35 / ftr37 / finTRIM family, member 35 / Q96LD4* / Q8C0E3* / TRIM47* / Trim80* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000008938858
ftr33 / finTRIM family, member 33 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000009503258
ftr08 / ftr30 / finTRIM family, member 30 / Q96LD4* / Q8C0E3* / TRIM47* / Trim80* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000009544858
ftr38 / finTRIM family, member 38 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000009567858
ftr93 / finTRIM family, member 93 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000003985257
ftr14 / finTRIM family, member 14 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000005329357
ftr61 / finTRIM family, member 61 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000005552057
ftr29 / finTRIM family, member 29 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000007535557
ftr37 / finTRIM family, member 37 / Trim80* / Q96LD4* / Q8C0E3* / TRIM47* / tripartite motif containing 47* / tripartite motif-containing 80*ENSDARG0000009274557


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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