ENSDARG00000112530


Danio rerio

Features
Gene ID: ENSDARG00000112530
  
Biological name :RF00392
  
Synonyms : RF00392
  
Possible biological names infered from orthology : Gm22447 / Gm22581 / Gm23346 / Gm23561 / Gm23568 / Gm24313 / Gm24568 / Gm24829 / Gm25517 / predicted gene, 22447 / predicted gene, 22581 / predicted gene, 23346 / predicted gene, 23561 / predicted gene, 23568 / predicted gene, 24313 / predicted gene, 24568 / predicted gene, 24829 / predicted gene, 25517 / small nucleolar RNA, H/ACA box 5A / small nucleolar RNA, H/ACA box 5B / small nucleolar RNA, H/ACA box 5C / SNORA5A / SNORA5B / SNORA5C
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 43080925
Gene end: 43081060
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl - ENSDARG00000112530
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RF00392ENSGALG00000025355Gallus gallus
 RF00392ENSGALG00000025361Gallus gallus
 RF00392ENSGALG00000017836Gallus gallus
 RF00392ENSGALG00000026888Gallus gallus
 RF00392ENSG00000207002Homo sapiens
 SNORA5AENSG00000206838Homo sapiens
 SNORA5BENSG00000200656Homo sapiens
 SNORA5CENSG00000201772Homo sapiens
 Gm22447ENSMUSG00000095507Mus musculus
 Gm22581ENSMUSG00000065669Mus musculus
 Gm23346ENSMUSG00000065750Mus musculus
 Gm23561ENSMUSG00000095221Mus musculus
 Gm23568ENSMUSG00000096558Mus musculus
 Gm24313ENSMUSG00000064495Mus musculus
 Gm24568ENSMUSG00000094516Mus musculus
 Gm24829ENSMUSG00000095703Mus musculus
 Gm25517ENSMUSG00000065799Mus musculus
 Snora5cENSMUSG00000065686Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RF00392 / SNORA5C* / SNORA5A* / SNORA5B* / small nucleolar RNA, H/ACA box 5A* / small nucleolar RNA, H/ACA box 5B* / small nucleolar RNA, H/ACA box 5C*ENSDARG0000011542991
RF00392 / SNORA5C* / SNORA5A* / SNORA5B* / small nucleolar RNA, H/ACA box 5A* / small nucleolar RNA, H/ACA box 5B* / small nucleolar RNA, H/ACA box 5C*ENSDARG0000011478171
RF00392 / Gm22581* / Gm23346* / Gm23561* / Gm23568* / Gm24313* / Gm24568* / Gm24829* / Gm25517* / SNORA5C* / Gm22447* / SNORA5A* / SNORA5B* / predicted gene, 23568* / predicted gene, 24313*...ENSDARG0000011363062


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match