ENSDARG00000115266


Danio rerio

Features
Gene ID: ENSDARG00000115266
  
Biological name :imp3
  
Synonyms : imp3 / IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)
  
Possible biological names infered from orthology : IMP3, U3 small nucleolar ribonucleoprotein / Q921Y2 / Q9NV31 / U3 small nucleolar ribonucleoprotein protein IMP3
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 9983079
Gene end: 9989947
  
Corresponding Affymetrix probe sets: Dr.17519.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000154715
Ensembl peptide - ENSDARP00000148639
NCBI entrez gene - 393237     See in Manteia.
RefSeq - NM_001291357
RefSeq Peptide - NP_001278286
swissprot - A5WV64
ZFIN ID - ZDB-GENE-040426-1062
Ensembl - ENSDARG00000115266
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 IMP3ENSG00000177971Homo sapiens
 Imp3ENSMUSG00000032288Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001912  Ribosomal protein S4/S9, N-terminal
 IPR002942  RNA-binding S4 domain
 IPR022801  Ribosomal protein S4/S9


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006364 rRNA processing IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0032040 small-subunit processome IBA
 cellular_componentGO:0034457 Mpp10 complex IBA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0030515 snoRNA binding IBA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000012495 mphosph10 / M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) / O00566* / Q810V0* / M-phase phosphoprotein 10* / U3 small nucleolar ribonucleoprotein protein MPP10 *  / complex
 ENSDARG00000054540 imp4 / IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) / Q8VHZ7* / Q96G21* / IMP4, U3 small nucleolar ribonucleoprotein* / U3 small nucleolar ribonucleoprotein protein IMP4 *  / complex






 

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