ENSDARG00000117011


Danio rerio

Features
Gene ID: ENSDARG00000117011
  
Biological name :ewsr1b
  
Synonyms : ewsr1b / EWS RNA-binding protein 1b
  
Possible biological names infered from orthology : EWSR1 / EWS RNA binding protein 1 / Q01844 / Q61545 / RNA-binding protein EWS
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 159504
Gene end: 178764
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000057247
swissprot - F1QM38
ZFIN ID - ZDB-GENE-030131-1600
Ensembl - ENSDARG00000117011
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EWSR1ENSGALG00000008149Gallus gallus
 EWSR1ENSG00000182944Homo sapiens
 Ewsr1ENSMUSG00000009079Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ewsr1b / EWS RNA-binding protein 1b / EWSR1* / Q01844* / Q61545* / RNA-binding protein EWS * / EWS RNA binding protein 1*ENSDARG0000002046596
ewsr1a / EWS RNA-binding protein 1a / EWSR1* / Q01844* / Q61545* / RNA-binding protein EWS * / EWS RNA binding protein 1*ENSDARG0000002025858
fus / FUS RNA binding protein / P35637* / P56959* / RNA-binding protein FUS *ENSDARG0000003796837
taf15 / TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor / Q92804* / TATA-box binding protein associated factor 15*ENSDARG0000007001930


Protein motifs (from Interpro)
Interpro ID Name
 IPR001876  Zinc finger, RanBP2-type
 IPR033109  RNA-binding protein EWS
 IPR034870  TAF15/EWS/TLS family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000278 mitotic cell cycle IMP
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0021954 central nervous system neuron development IMP
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain morphology , abnormal
brain apoptotic , abnormal
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 ZFA:0000042 midbrain hindbrain boundary midbrain hindbrain boundary morphology , abnormal
Show

 ZFA:0000075 spinal cord spinal cord apoptotic , abnormal
spinal cord neuron disorganized , abnormal
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 ZFA:0001094 whole organism whole organism lethal (sensu genetics) , abnormal
Show

 ZFA:0009000 cell cell spindle structure , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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