ENSG00000006007


Homo sapiens

Features
Gene ID: ENSG00000006007
  
Biological name :GDE1
  
Synonyms : GDE1 / glycerophosphodiester phosphodiesterase 1 / Q9NZC3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: -1
Band: p12.3
Gene start: 19501689
Gene end: 19522145
  
Corresponding Affymetrix probe sets: 202593_s_at (Human Genome U133 Plus 2.0 Array)   226214_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000454755
Ensembl peptide - ENSP00000261386
Ensembl peptide - ENSP00000456295
Ensembl peptide - ENSP00000457431
NCBI entrez gene - 51573     See in Manteia.
OMIM - 605943
RefSeq - NM_016641
RefSeq - NM_001324066
RefSeq - NM_001324067
RefSeq Peptide - NP_001310995
RefSeq Peptide - NP_057725
RefSeq Peptide - NP_001310996
swissprot - Q9NZC3
swissprot - H3BNA5
swissprot - H3BRL5
swissprot - H3BU22
Ensembl - ENSG00000006007
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gde1ENSDARG00000055108Danio rerio
 GDE1ENSGALG00000006916Gallus gallus
 Gde1ENSMUSG00000033917Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004129  Glycerophosphoryl diester phosphodiesterase
 IPR017946  PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily
 IPR030395  Glycerophosphodiester phosphodiesterase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006644 phospholipid metabolic process IEA
 biological_processGO:0046475 glycerophospholipid catabolic process TAS
 biological_processGO:0070291 N-acylethanolamine metabolic process IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane TAS
 cellular_componentGO:0030659 cytoplasmic vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 molecular_functionGO:0004622 lysophospholipase activity IEA
 molecular_functionGO:0008081 phosphoric diester hydrolase activity IEA
 molecular_functionGO:0008889 glycerophosphodiester phosphodiesterase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0047395 glycerophosphoinositol glycerophosphodiesterase activity TAS


Pathways (from Reactome)
Pathway description
Glycerophospholipid catabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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