ENSG00000010803


Homo sapiens
domaindna-templatedSCMH1sterilealphamotifproteinbindingregulationmbtrepeatpointedsuperfamilysledpolycombgrouprnaregionchromatinremodelingmulticellularorganismdevelopmentspermatogenesisanteriorposteriorpatternspecificationgenesilencing

Features
Gene ID: ENSG00000010803
  
Biological name :SCMH1
  
Synonyms : Q96GD3 / SCMH1 / Scm polycomb group protein homolog 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p34.2
Gene start: 41027200
Gene end: 41242154
  
Corresponding Affymetrix probe sets: 221216_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000403974
Ensembl peptide - ENSP00000386079
Ensembl peptide - ENSP00000479881
Ensembl peptide - ENSP00000318094
Ensembl peptide - ENSP00000337352
Ensembl peptide - ENSP00000354656
Ensembl peptide - ENSP00000354996
Ensembl peptide - ENSP00000361676
Ensembl peptide - ENSP00000361677
Ensembl peptide - ENSP00000361678
Ensembl peptide - ENSP00000380356
Ensembl peptide - ENSP00000380359
NCBI entrez gene - 22955     See in Manteia.
OMIM - 616396
RefSeq - XM_017000713
RefSeq - NM_001031694
RefSeq - NM_001172218
RefSeq - NM_001172219
RefSeq - NM_001172220
RefSeq - NM_001172221
RefSeq - NM_001172222
RefSeq - NM_001350667
RefSeq - NM_012236
RefSeq - XM_017000703
RefSeq - XM_017000704
RefSeq - XM_017000705
RefSeq - XM_017000706
RefSeq - XM_017000707
RefSeq - XM_017000708
RefSeq - XM_017000709
RefSeq - XM_017000710
RefSeq - XM_017000711
RefSeq - XM_017000712
RefSeq - XM_006710462
RefSeq - XM_006710464
RefSeq - XM_011541032
RefSeq - XM_011541033
RefSeq - XM_011541034
RefSeq - XM_011541035
RefSeq - XM_011541036
RefSeq - XM_011541039
RefSeq - XM_011541040
RefSeq - XM_011541043
RefSeq - XM_011541044
RefSeq - XM_011541045
RefSeq - XM_017000698
RefSeq - XM_017000699
RefSeq - XM_017000700
RefSeq - XM_017000701
RefSeq - XM_017000702
RefSeq Peptide - NP_001026864
RefSeq Peptide - NP_001165689
RefSeq Peptide - NP_001165690
RefSeq Peptide - NP_001165691
RefSeq Peptide - NP_001165692
RefSeq Peptide - NP_001165693
RefSeq Peptide - NP_001337596
RefSeq Peptide - NP_036368
swissprot - Q96GD3
swissprot - A0A087WW29
Ensembl - ENSG00000010803
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 scmh1ENSDARG00000104311Danio rerio
 SCMH1ENSGALG00000000672Gallus gallus
 Scmh1ENSMUSG00000000085Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SCML2 / Q9UQR0 / Scm polycomb group protein like 2ENSG0000010209847
SCML4 / Q8N228 / Scm polycomb group protein like 4ENSG0000014628529
Q9UHJ3 / SFMBT1 / Scm like with four mbt domains 1ENSG0000016393525
Q8NA19 / L3MBTL4 / L3MBTL4, histone methyl-lysine binding proteinENSG0000015465523
Q5VUG0 / SFMBT2 / Scm like with four mbt domains 2ENSG0000019887923
Q9Y468 / L3MBTL1 / L3MBTL1, histone methyl-lysine binding proteinENSG0000018551320
Q96JM7 / L3MBTL3 / L3MBTL3, histone methyl-lysine binding proteinENSG0000019894519
Q969R5 / L3MBTL2 / L3MBTL2, polycomb repressive complex 1 subunitENSG0000010039513
MBTD1 / Q05BQ5 / mbt domain containing 1ENSG0000001125812


Protein motifs (from Interpro)
Interpro ID Name
 IPR001660  Sterile alpha motif domain
 IPR004092  Mbt repeat
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR021987  SLED domain
 IPR033763  Polycomb group protein, RNA binding region


Gene Ontology (GO)
cellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentmulticellular organism reproductioncellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentmulticellular organism reproductioncellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentmulticellular organism reproductioncellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentmulticellular organism reproductioncellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentmulticellular organism reproductioncellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentmulticellular organism reproductioncellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentmulticellular organism reproductioncellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentmulticellular organism reproductioncellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentmulticellular organism reproductioncellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processanatomical structure developmentmulticellular organism reproductioncellular componencellular component organizationnitrogen compoundnitrogen compound metabolic processbiosynthetic procbiosynthetic processcellular metabolicellular metabolic processprimary metabolicprimary metabolic processorganic substanceorganic substance metabolic processanatomical structanatomical structure developmentmulticellular orgmulticellular organism reproduction
protein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein binding
cellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellcellorganelleorganellemembrane-enclosed lumenmembrane-enclosed lumen
TypeGO IDTermEv.Code
 biological_processGO:0006338 chromatin remodeling IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0009952 anterior/posterior pattern specification IEA
 biological_processGO:0016458 gene silencing ISS
 biological_processGO:0045892 negative regulation of transcription, DNA-templated NAS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0010369 chromocenter IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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