ENSG00000064995


Homo sapiens
transcriptionTAF11rnapolymeraseiipromoterproteinregulationinitiationbindingactivityhivdna-templatedsnrnacomplexreceptorescapetafii-likehistone-foldelongationhostviraltranscriptionalpreinitiationassemblysignaltransductionpclassmediator

Features
Gene ID: ENSG00000064995
  
Biological name :TAF11
  
Synonyms : Q15544 / TAF11 / TATA-box binding protein associated factor 11
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: p21.31
Gene start: 34877778
Gene end: 34888089
  
Corresponding Affymetrix probe sets: 1558135_at (Human Genome U133 Plus 2.0 Array)   1558136_s_at (Human Genome U133 Plus 2.0 Array)   209358_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000354633
Ensembl peptide - ENSP00000408121
NCBI entrez gene - 6882     See in Manteia.
OMIM - 600772
RefSeq - XM_011514827
RefSeq - NM_001270488
RefSeq - NM_005643
RefSeq Peptide - NP_005634
RefSeq Peptide - NP_001257417
swissprot - Q15544
Ensembl - ENSG00000064995
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 taf11ENSDARG00000037855Danio rerio
 TAF11ENSGALG00000002735Gallus gallus
 Taf11ENSMUSG00000024218Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
A6NLC8 / AC106774.8 / Putative TAF11-like protein ENSP00000332601 ENSG0000028437358
AC106774.10ENSG0000028455257
AC233724.6ENSG0000024915655
AC233724.15ENSG0000028374055
AC233724.16ENSG0000028377654
AC106774.7ENSG0000028428354
AC233724.12ENSG0000025078253
AC233724.17ENSG0000028396753
AC233724.18ENSG0000028398853
AC106774.5ENSG0000028404253
AC106774.6ENSG0000028423453
AC233724.19ENSG0000028435653
AC106774.9ENSG0000028443953
AC233724.20ENSG0000028446553


Protein motifs (from Interpro)
Interpro ID Name
 IPR006809  TAFII28-like protein
 IPR009072  Histone-fold


Gene Ontology (GO)
nitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processinterspecies interaction between organismscellular component organizationcellular component biogenesiscell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processinterspecies interaction between organismscellular component organizationcellular component biogenesiscell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processinterspecies interaction between organismscellular component organizationcellular component biogenesiscell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processinterspecies interaction between organismscellular component organizationcellular component biogenesiscell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processinterspecies interaction between organismscellular component organizationcellular component biogenesiscell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processinterspecies interaction between organismscellular component organizationcellular component biogenesiscell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processinterspecies interaction between organismscellular component organizationcellular component biogenesiscell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processinterspecies interaction between organismscellular component organizationcellular component biogenesiscell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processinterspecies interaction between organismscellular component organizationcellular component biogenesiscell communicationcellular response to stimulusnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processinterspecies interaction between organismscellular component organizationcellular component biogenesiscell communicationcellular response to stimulusnitrogen componitrogen compound metabolic processbiosynthetic pbiosynthetic processcellular metabcellular metabolic processprimary metaboprimary metabolic processorganic substaorganic substance metabolic processinterspecies iinterspecies interaction between organismscellular compocellular component organizationcellular compocellular component biogenesiscell communicacell communicationcellular respocellular response to stimulus
transcription coregulator activityprotein bindingtranscription coregulator activityprotein bindingtranscription coregulator activityprotein bindingtranscription coregulator activityprotein bindingtranscription coregulator activityprotein bindingtranscription coregulator activityprotein bindingtranscription coregulator activityprotein bindingtranscription coregulator activityprotein bindingtranscription coregulator activityprotein bindingtranscription coregulator activityprotein bindingtranscription coregulator activitytranscription coregulator activityprotein bindingprotein binding
cellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellorganellemembrane-enclosed lumenprotein-containing complexcellcellorganelleorganellemembrane-enclosed lumenmembrane-enclosed lumenprotein-containing complexprotein-containing complex
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II TAS
 biological_processGO:0006367 transcription initiation from RNA polymerase II promoter TAS
 biological_processGO:0006368 transcription elongation from RNA polymerase II promoter TAS
 biological_processGO:0042795 snRNA transcription by RNA polymerase II TAS
 biological_processGO:0043923 positive regulation by host of viral transcription IDA
 biological_processGO:0051123 RNA polymerase II transcriptional preinitiation complex assembly IBA
 biological_processGO:1901796 regulation of signal transduction by p53 class mediator TAS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005669 transcription factor TFIID complex IDA
 cellular_componentGO:0005794 Golgi apparatus IDA
 molecular_functionGO:0003713 transcription coactivator activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042809 vitamin D receptor binding IPI
 molecular_functionGO:0046966 thyroid hormone receptor binding IPI
 molecular_functionGO:0046982 protein heterodimerization activity IEA
 molecular_functionGO:0047485 protein N-terminus binding IPI


Pathways (from Reactome)
Pathway description
HIV Transcription Initiation
RNA Polymerase II HIV Promoter Escape
Transcription of the HIV genome
RNA Polymerase II Pre-transcription Events
Regulation of TP53 Activity through Phosphorylation
RNA polymerase II transcribes snRNA genes
RNA Polymerase II Promoter Escape
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening
RNA Polymerase II Transcription Initiation
RNA Polymerase II Transcription Initiation And Promoter Clearance


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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