ENSG00000100243


Homo sapiens

Features
Gene ID: ENSG00000100243
  
Biological name :CYB5R3
  
Synonyms : CYB5R3 / cytochrome b5 reductase 3 / P00387
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 22
Strand: -1
Band: q13.2
Gene start: 42617840
Gene end: 42649568
  
Corresponding Affymetrix probe sets: 1554574_a_at (Human Genome U133 Plus 2.0 Array)   201885_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000385679
Ensembl peptide - ENSP00000384834
Ensembl peptide - ENSP00000403439
Ensembl peptide - ENSP00000338461
Ensembl peptide - ENSP00000354468
Ensembl peptide - ENSP00000384457
NCBI entrez gene - 1727     See in Manteia.
OMIM - 613213
RefSeq - NM_001129819
RefSeq - NM_000398
RefSeq - NM_001171660
RefSeq - NM_001171661
RefSeq - NM_007326
RefSeq Peptide - NP_001165131
RefSeq Peptide - NP_000389
RefSeq Peptide - NP_001123291
RefSeq Peptide - NP_001165132
RefSeq Peptide - NP_015565
swissprot - P00387
swissprot - B1AHF3
Ensembl - ENSG00000100243
  
Related genetic diseases (OMIM): 250800 - Methemoglobinemia, type I, 250800
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cyb5r3ENSDARG00000005891Danio rerio
 CYB5R3ENSGALG00000014122Gallus gallus
 Cyb5r3ENSMUSG00000018042Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CYB5R1 / Q9UHQ9 / cytochrome b5 reductase 1ENSG0000015934854
CYB5R2 / Q6BCY4 / cytochrome b5 reductase 2ENSG0000016639449
CYB5R4 / Q7L1T6 / cytochrome b5 reductase 4ENSG0000006561525


Protein motifs (from Interpro)
Interpro ID Name
 IPR001433  Oxidoreductase FAD/NAD(P)-binding
 IPR001709  Flavoprotein pyridine nucleotide cytochrome reductase
 IPR001834  NADH:cytochrome b5 reductase (CBR)
 IPR008333  Oxidoreductase, FAD-binding domain
 IPR017927  Ferredoxin reductase-type FAD-binding domain
 IPR017938  Riboflavin synthase-like beta-barrel


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006694 steroid biosynthetic process IEA
 biological_processGO:0006695 cholesterol biosynthetic process IEA
 biological_processGO:0006805 xenobiotic metabolic process TAS
 biological_processGO:0008015 blood circulation TAS
 biological_processGO:0008202 steroid metabolic process IEA
 biological_processGO:0008203 cholesterol metabolic process IEA
 biological_processGO:0016126 sterol biosynthetic process IEA
 biological_processGO:0019852 L-ascorbic acid metabolic process TAS
 biological_processGO:0043312 neutrophil degranulation TAS
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005737 cytoplasm TAS
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005741 mitochondrial outer membrane TAS
 cellular_componentGO:0005743 mitochondrial inner membrane IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005811 lipid droplet IDA
 cellular_componentGO:0005833 hemoglobin complex TAS
 cellular_componentGO:0016020 membrane TAS
 cellular_componentGO:0035578 azurophil granule lumen TAS
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0004128 cytochrome-b5 reductase activity, acting on NAD(P)H TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016208 AMP binding IEA
 molecular_functionGO:0016491 oxidoreductase activity IBA
 molecular_functionGO:0043531 ADP binding IEA
 molecular_functionGO:0050660 flavin adenine dinucleotide binding IEA
 molecular_functionGO:0051287 NAD binding IEA


Pathways (from Reactome)
Pathway description
Vitamin C (ascorbate) metabolism
Phase I - Functionalization of compounds
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000961 Cyanosis 
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 HP:0001249 Mental retardation 
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001276 Hypertonia 
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 HP:0001510 Growth retardation 
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 HP:0001901 Erythrocytosis 
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 HP:0002179 Opisthotonus 
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 HP:0002315 Headache "Cephalgia, or pain in the head originating from the cerebral vault." [HPO:curators]
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 HP:0002875 Exertional dyspnea 
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 HP:0012119 Methemoglobinemia "Abnormally increased levels of Methemoglobinemia in the blood. In this form of hemoglobin, there is an oxidized ferric iron (Fe +3) rather than the reduced ferrous form (Fe 2+) that is normally found in hemoglobin. Methemoglobin has a reduced affinity for oxygen, resulting in a reduced ability to release oxygen to tissues." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000103018 CYB5B / O43169 / cytochrome b5 type B  / complex
 ENSG00000166347 CYB5A / P00167 / cytochrome b5 type A  / reaction
 ENSG00000117791 MARC2 / Q969Z3 / mitochondrial amidoxime reducing component 2  / complex
 ENSG00000186205 MARC1 / Q5VT66 / mitochondrial amidoxime reducing component 1  / complex






 

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