ENSG00000113946


Homo sapiens

Features
Gene ID: ENSG00000113946
  
Biological name :CLDN16
  
Synonyms : claudin 16 / CLDN16 / Q9Y5I7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: q28
Gene start: 190322541
Gene end: 190412143
  
Corresponding Affymetrix probe sets: 220332_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000264734
Ensembl peptide - ENSP00000414136
NCBI entrez gene - 10686     See in Manteia.
OMIM - 603959
RefSeq - NM_006580
RefSeq Peptide - NP_006571
swissprot - A0SDD8
swissprot - Q9Y5I7
Ensembl - ENSG00000113946
  
Related genetic diseases (OMIM): 248250 - Hypomagnesemia 3, renal, 248250
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLDN16ENSGALG00000025821Gallus gallus
 Cldn16ENSMUSG00000038148Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003927  Claudin-16
 IPR004031  PMP-22/EMP/MP20/Claudin superfamily
 IPR006187  Claudin
 IPR017974  Claudin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006875 cellular metal ion homeostasis TAS
 biological_processGO:0007588 excretion TAS
 biological_processGO:0016338 calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules ISS
 biological_processGO:1903830 magnesium ion transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005923 bicellular tight junction IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0005198 structural molecule activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0015095 magnesium ion transmembrane transporter activity TAS
 molecular_functionGO:0042802 identical protein binding ISS


Pathways (from Reactome)
Pathway description
Tight junction interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000010 Recurrent urinary tract infections "Repeated infections of the urinary tract." [HPO:curators]
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 HP:0000103 Polyuria 
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 HP:0000121 Nephrocalcinosis 
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 HP:0000483 Astigmatism 
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000540 Hypermetropia 
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 HP:0000545 Myopia 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000787 Kidney stones 
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 HP:0000790 Hematuria "The presence of blood in the urine. Hematuria may be gross hematuria (visible to the naked eye) or microscopic hematuria (detected by dipstick or microscopic examination of the urine)." [HPO:curators]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001281 Tetany 
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 HP:0001508 Failure to thrive 
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 HP:0001947 Renal tubular acidosis 
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 HP:0001959 Polydipsia 
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 HP:0002027 Abdominal pain 
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 HP:0002149 Hyperuricemia "An abnormally high level of uric acid in the blood." [HPO:curators]
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 HP:0002150 Hypercalciuria 
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 HP:0002917 Hypomagnesemia 
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 HP:0003621 Juvenile onset 
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 HP:0005567 Renal magnesium wasting 
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 HP:0008872 Feeding problems in infancy 
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 HP:0012405 Hypocitraturia "A lower than normal concentration of `citrate(3-)` (CHEBI:16947) in the urine." [HPO:probinson]
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 HP:0012608 Hypermagnesiuria "An increased concentration of magnesium the `urine` (FMA:12274)." [Eurenomics:fschaefer]
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 HP:0012622 Chronic kidney disease "Functional anomaly of the kidney persisting for at least three months." [Eurenomics:ewuehl]
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 HP:0012637 Renal calcium wasting "High urine calcium in the presence of hypocalcemia." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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