ENSG00000119866


Homo sapiens

Features
Gene ID: ENSG00000119866
  
Biological name :BCL11A
  
Synonyms : B cell CLL/lymphoma 11A / BCL11A / Q9H165
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: -1
Band: p16.1
Gene start: 60450520
Gene end: 60555154
  
Corresponding Affymetrix probe sets: 1559078_at (Human Genome U133 Plus 2.0 Array)   210347_s_at (Human Genome U133 Plus 2.0 Array)   219497_s_at (Human Genome U133 Plus 2.0 Array)   219498_s_at (Human Genome U133 Plus 2.0 Array)   222891_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000494996
Ensembl peptide - ENSP00000496736
Ensembl peptide - ENSP00000496588
Ensembl peptide - ENSP00000496304
Ensembl peptide - ENSP00000496168
Ensembl peptide - ENSP00000495862
Ensembl peptide - ENSP00000495759
Ensembl peptide - ENSP00000338774
Ensembl peptide - ENSP00000349300
Ensembl peptide - ENSP00000351307
Ensembl peptide - ENSP00000352648
Ensembl peptide - ENSP00000487844
Ensembl peptide - ENSP00000488390
Ensembl peptide - ENSP00000488636
Ensembl peptide - ENSP00000488886
Ensembl peptide - ENSP00000493484
Ensembl peptide - ENSP00000493887
Ensembl peptide - ENSP00000494014
Ensembl peptide - ENSP00000494397
NCBI entrez gene - 53335     See in Manteia.
OMIM - 606557
RefSeq - XM_017004334
RefSeq - XM_017004333
RefSeq - XM_011532912
RefSeq - XM_011532910
RefSeq - NM_018014
RefSeq - NM_022893
RefSeq - XM_011532909
RefSeq - NM_138559
RefSeq Peptide - NP_060484
RefSeq Peptide - NP_075044
RefSeq Peptide - NP_612569
swissprot - Q9H165
swissprot - D9YZV9
swissprot - A0A0J9YXG2
swissprot - A0A0J9YY13
swissprot - A0A0J9YYJ9
swissprot - D6W5D9
Ensembl - ENSG00000119866
  
Related genetic diseases (OMIM): 617101 - Dias-Logan syndrome, 617101

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 bcl11aaENSDARG00000061352Danio rerio
 bcl11abENSDARG00000063153Danio rerio
 BCL11AENSGALG00000034048Gallus gallus
 Bcl11aENSMUSG00000000861Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BCL11B / Q9C0K0 / B cell CLL/lymphoma 11BENSG0000012715262
Q8WUU4 / ZNF296 / zinc finger protein 296ENSG0000017068420


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007165 signal transduction IBA
 biological_processGO:0010628 positive regulation of gene expression IEA
 biological_processGO:0016925 protein sumoylation ISS
 biological_processGO:0022008 neurogenesis IBA
 biological_processGO:1903860 negative regulation of dendrite extension IEA
 biological_processGO:1904800 negative regulation of neuron remodeling IEA
 biological_processGO:1905232 cellular response to L-glutamate IEA
 biological_processGO:2000171 negative regulation of dendrite development IEA
 biological_processGO:2000173 negative regulation of branching morphogenesis of a nerve IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0014069 postsynaptic density IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0019901 protein kinase binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000219 Thin upper lip 
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 HP:0000232 Everted lower lip 
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000278 Retrognathia 
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 HP:0000286 Epicanthus "An epicanthal fold is a semilunar fold of skin that extends from the upper eyelid across the medial canthal area to the lower eyelid." [HPO:curators]
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000378 Cup-shaped ears "Small auricles that grow forward over the meatus (ear canal)." [HPO:curators]
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 HP:0000396 Overfolded helices "A condition in which the upper edge of the ear is folded over to a greater degree than normal." [HPO:curators]
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000494 Downward slanting palpebral fissures 
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 HP:0001249 Mental retardation 
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001272 Cerebellar atrophy 
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 HP:0001382 Joint hypermobility "The ability of a joint to move beyond its normal range of motion." [HPO:curators]
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 HP:0003577 Onset at birth 
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 HP:0011800 Midface retrusion "Posterior positions and/or vertical shortening of the infraorbital and perialar regions, or increased concavity of the face and/or reduced nasolabial angle." [DDD:jclayton-smith]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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