ENSG00000122068


Homo sapiens
mrnaFYTTD1bindingnucleustransporttranscriptuap-interactingfactorexportintracellularnucleoplasmnuclearspeckrnaproteincleavagegrowingterminationregionmaturederivedintron-containing-endprocessing

Features
Gene ID: ENSG00000122068
  
Biological name :FYTTD1
  
Synonyms : forty-two-three domain containing 1 / FYTTD1 / Q96QD9
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: q29
Gene start: 197737179
Gene end: 197787596
  
Corresponding Affymetrix probe sets: 224641_at (Human Genome U133 Plus 2.0 Array)   224642_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000400191
Ensembl peptide - ENSP00000409257
Ensembl peptide - ENSP00000417742
Ensembl peptide - ENSP00000241502
Ensembl peptide - ENSP00000389557
Ensembl peptide - ENSP00000393746
Ensembl peptide - ENSP00000394631
Ensembl peptide - ENSP00000399896
NCBI entrez gene - 84248     See in Manteia.
OMIM - 616933
RefSeq - NM_032288
RefSeq - NM_001011537
RefSeq Peptide - NP_001011537
RefSeq Peptide - NP_115664
swissprot - H9KVD5
swissprot - A0A024R9K4
swissprot - Q96QD9
swissprot - H9KVC1
swissprot - H9KVC6
swissprot - H9KVD1
Ensembl - ENSG00000122068
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FYTTD1ENSGALG00000007581Gallus gallus
 Fyttd1ENSMUSG00000022800Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR009782  UAP56-interacting factor


Gene Ontology (GO)
macromolecule localizationestablishment of localizationorganic substance metabolic processcellular localizationprotein-containing complex localizationmacromolecule localizationestablishment of localizationorganic substance metabolic processcellular localizationprotein-containing complex localizationmacromolecule localizationestablishment of localizationorganic substance metabolic processcellular localizationprotein-containing complex localizationmacromolecule localizationestablishment of localizationorganic substance metabolic processcellular localizationprotein-containing complex localizationmacromolecule localizationestablishment of localizationorganic substance metabolic processcellular localizationprotein-containing complex localizationmacromolecule localizationestablishment of localizationorganic substance metabolic processcellular localizationprotein-containing complex localizationmacromolecule localizationestablishment of localizationorganic substance metabolic processcellular localizationprotein-containing complex localizationmacromolecule localizationestablishment of localizationorganic substance metabolic processcellular localizationprotein-containing complex localizationmacromolecule localizationestablishment of localizationorganic substance metabolic processcellular localizationprotein-containing complex localizationmacromolecule localizationestablishment of localizationorganic substance metabolic processcellular localizationprotein-containing complex localizationmacromolecule localizationmacromolecule localizationestablishment of localizatioestablishment of localizationorganic substance metabolic organic substance metabolic processcellular localizationcellular localizationprotein-containing complex lprotein-containing complex localization
organic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingheterocyclic compound bindingprotein bindingorganic cyclic compound bindingorganic cyclic compound bindingheterocyclic compound bindingheterocyclic compound bindingprotein bindingprotein binding
cellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellorganellemembrane-enclosed lumencellcellorganelleorganellemembrane-enclosed lumenmembrane-enclosed lumen
TypeGO IDTermEv.Code
 biological_processGO:0006406 mRNA export from nucleus IEA
 biological_processGO:0051028 mRNA transport IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0016607 nuclear speck IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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