ENSG00000126814


Homo sapiens

Features
Gene ID: ENSG00000126814
  
Biological name :TRMT5
  
Synonyms : Q32P41 / TRMT5 / tRNA methyltransferase 5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 14
Strand: -1
Band: q23.1
Gene start: 60971451
Gene end: 60981358
  
Corresponding Affymetrix probe sets: 221952_x_at (Human Genome U133 Plus 2.0 Array)   227653_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000261249
Ensembl peptide - ENSP00000451666
Ensembl peptide - ENSP00000452567
NCBI entrez gene - 57570     See in Manteia.
OMIM - 611023
RefSeq - XM_011537017
RefSeq - NM_001350254
RefSeq - NM_020810
RefSeq - XM_005267916
RefSeq Peptide - NP_001337183
RefSeq Peptide - NP_065861
swissprot - G3V5X1
swissprot - Q32P41
swissprot - G3V494
Ensembl - ENSG00000126814
  
Related genetic diseases (OMIM): 616539 - Combined oxidative phosphorylation deficiency 26, 616539
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trmt5ENSDARG00000069278Danio rerio
 TRMT5ENSGALG00000011904Gallus gallus
 Trmt5ENSMUSG00000034442Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR025792  tRNA (guanine(37)-N(1))-methyltransferase, eukaryotic
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase
 IPR030382  SAM-dependent methyltransferase TRM5/TYW2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0030488 tRNA methylation IEA
 biological_processGO:0032259 methylation IEA
 biological_processGO:0070901 mitochondrial tRNA methylation IMP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005759 mitochondrial matrix IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0009019 tRNA (guanine-N1-)-methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0052906 tRNA (guanine(37)-N(1))-methyltransferase activity IEA


Pathways (from Reactome)
Pathway description
Synthesis of wybutosine at G37 of tRNA(Phe)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000160 Microstomia "The presence of an abnormally small `mouth` (FMA:49184)." [HPO:curators]
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 HP:0000325 Triangular facies 
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 HP:0000592 Blue sclerae 
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001265 Hyporeflexia 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001394 Cirrhosis 
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 HP:0001508 Failure to thrive 
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 HP:0002024 Malabsorption 
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 HP:0002151 Increased serum lactate "Abnormally increased level of blood lactate (2-hydroxypropanoic acid). Lactate is produced from pyruvate by lactate dehydrogenase during normal metabolism." [HPO:curators]
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 HP:0002465 Poor speech 
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 HP:0002875 Exertional dyspnea 
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 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
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 HP:0003546 Exercise intolerance 
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 HP:0003812 Phenotypic variability 
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 HP:0011922 Abnormal activity of mitochondrial respiratory chain "An increased or decreased activity of the `mitochondrial respiratory chain` (GO:0005746)." [HPO:probinson]
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 HP:0012444 Brain atrophy "Partial or complete wasting (loss) of brain tissue that was once present." [HPO:probinson]
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 HP:0012448 Delayed myelination "`Delayed` (PATO:0000502) `myelination` (GO:0042552)." [ORCID:0000-0001-5208-3432]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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